#!/bin/ksh

#PBS -N paraUmxmit
#PBS -o /lfs/h2/emc/ptmp/manuel.pondeca/airportproj/para_urma2p5_2dvar/logs/urma_mintmaxt_prep.out
#PBS -e /lfs/h2/emc/ptmp/manuel.pondeca/airportproj/para_urma2p5_2dvar/logs/urma_mintmaxt_prep.out
#PBS -l select=1:ncpus=1:mem=4000MB
#PBS -l walltime=00:30:00
#PBS -q "dev"
#PBS -A RTMA-DEV

set -ax

echo "Master Host: $PBS_O_HOST"
echo "Nodes:"; cat $PBS_NODEFILE
echo "PBS_O_WORKDIR= $PBS_O_WORKDIR"

export ntasks=1
export ppn=1
export threads=1


export configfile=/lfs/h2/emc/ptmp/$USER/airportproj/config/urma/para/urma2p5/urma2p5_envir.sh
source $configfile

MYCOMROOT=$COMROOT  #Add this to preserve $COMROOT value which is unset iI believe in purge / 2 Nov2021

iflg0=+1


if (((${cyc} == ${cyc_mitm_m1}) && (${minmaxt_prep_flg} == ${iflg0})))  ; then
   echo "test"
   if [[ $thismachine == 'IBM' ]] ; then
.    /usrx/local/Modules/3.2.9/init/ksh
      module purge
      module load ics/14.0.2
      module load prod_util
      module load grib_util/v1.0.5
   elif [[ $thismachine == 'DELL' ]] ; then
.    /usrx/local/prod/lmod/lmod/init/ksh
      module purge
      module load ips/18.0.1.163
      module load prod_util/1.1.0
      module load grib_util/1.0.6
   elif [[ $thismachine == 'CRAY' ]] ; then
     echo "test"
.    /usr/share/lmod/lmod/init/ksh
      module purge
      moduledir=$HOMEurma/emc/modulefiles/URMA
      module use ${moduledir}
      source $HOMEurma/versions/run.ver
      module load v${vernum}_for_${thismachine}.minmax
      module list
      echo $PATH
      sleep 1
   fi
   echo "test"
   export PREP_MINMAXT_COMOUT=${PREP_MINMAXT_DIR}
   export COM_IN=${MYCOMROOT}/${NET}/${envir}
   export R_COM_IN=$MINMAXT_R_COM_IN
   export COM_IN_ALT=$MINMAXT_COM_IN_ALT
   export R_COM_IN_ALT=$MINMAXT_R_COM_IN_ALT

   export DATA=${DATA_MINT_PREP}
   mkdir -p $DATA
   cd $DATA

   export job=MINT_PREP
   export jlogfile=$jlogfile_mint_prep
   export pgmout=stdout_mint_prep

   if [[ $thismachine == 'IBM' ]] ; then
     sh $utilscript/setup.sh
   elif [[ $thismachine == 'DELL' ]] ; then
     cp $UTILROOT/ush/err_chk   .; chmod +x err_chk
     cp $UTILROOT/ush/err_exit  .; chmod +x err_exit
     cp $UTILROOT/ush/prep_step .; chmod +x prep_step
     cp $UTILROOT/ush/postmsg   .; chmod +x postmsg
     cp $UTILROOT/ush/setpdy.sh .; chmod +x setpdy.sh
   elif [[ $thismachine == 'CRAY' ]] ; then 
     sh $utilscript/setup.sh
   fi

   $lscripts_emc/ex${NET}_getminmaxt_input.sh "${minmaxt_grids}"
   export err=$?; err_chk

   ic=0
   while [ $ic -le 10 ] ; do
      if [ -s $COMOUT/done_getminmaxt_input.txt ] ; then
          sleep 10
          break
        else
          echo "run_mint_prep_ph2.ll: sleeping for 30 seconds"
          sleep 30
      fi
   done

   export FIX${NET}=$FIXdir2
#  export COMINobsproc_urma=$COMINobsproc_urma  #just a reminder
   export COMOUT=$COMINobsproc_urma            #location to write out mintobs file
   mkdir -p $COMOUT
   $lscripts_minmaxt/ex${NET}_mintobs.sh "${minmaxt_grids}"
   export err=$? #; err_chk

   #if obs job fails, go ahead and run other jobs.  Analysis can run without obs
   if [[ $err -ne 0 ]] ; then
       msg="WARNING: URMA minT obs job failure for cycle ${PDY} (20Z URMA run).  MinT analysis will run, but without obs"
       echo "$msg" | mail.py
   fi

   export FIX${NET}=$FIXdir2
   export COM_IN=$PREP_MINMAXT_DIR
   export COMOUT2p5=${MYCOMROOT}/${NET}/${envir}/urma2p5.${PDY}  ;  mkdir -p $COMOUT2p5 #location to write out minT bckg and maxRH for conus
   export COMOUTak=${MYCOMROOT}/${NET}/${envir}/akurma.${PDY}    ;  mkdir -p $COMOUTak  #location to write out minT bckg and maxRH for alaska
   export COMOUThi=${MYCOMROOT}/${NET}/${envir}/hiurma.${PDY}    ;  mkdir -p $COMOUThi  #location to write out minT bckg and maxRH for hawaii
   export COMOUTpr=${MYCOMROOT}/${NET}/${envir}/prurma.${PDY}    ;  mkdir -p $COMOUTpr  #location to write out minT bckg and maxRH for prico

   $lscripts_minmaxt/ex${NET}_mintbg.sh "${minmaxt_grids}"
   export err=$?; err_chk

   $lscripts_minmaxt/ex${NET}_maxrh.sh "${minmaxt_grids}"
   export err=$?; err_chk
fi

if (((${cyc} == ${cyc_mxtm_m1}) && (${minmaxt_prep_flg} == ${iflg0})))  ; then

   if [[ $thismachine == 'IBM' ]] ; then
.    /usrx/local/Modules/3.2.9/init/ksh
      module purge
      module load ics/14.0.2
      module load prod_util
      module load grib_util/v1.0.5
   elif [[ $thismachine == 'DELL' ]] ; then
.    /usrx/local/prod/lmod/lmod/init/ksh
      module purge
      module load ips/18.0.1.163
      module load prod_util/1.1.0
      module load grib_util/1.0.6
   elif [[ $thismachine == 'CRAY' ]] ; then
.    /usr/share/lmod/lmod/init/ksh
      module purge
      moduledir=$HOMEurma/emc/modulefiles/URMA
      module use ${moduledir}
      source $HOMEurma/versions/run.ver
      module load v${vernum}_for_${thismachine}.minmax
      module list
      echo $PATH
      sleep 1

   fi

   export PREP_MINMAXT_COMOUT=$PREP_MINMAXT_DIR
   export COM_IN=${MYCOMROOT}/${NET}/${envir}
   export R_COM_IN=$MINMAXT_R_COM_IN
   export COM_IN_ALT=$MINMAXT_COM_IN_ALT
   export R_COM_IN_ALT=$MINMAXT_R_COM_IN_ALT

   export DATA=${DATA_MAXT_PREP}
   mkdir -p $DATA
   cd $DATA

   export job=MAXT_PREP
   export jlogfile=$jlogfile_maxt_prep
   export pgmout=stdout_maxt_prep

   if [[ $thismachine == 'IBM' ]] ; then
     sh $utilscript/setup.sh
   elif [[ $thismachine == 'DELL' ]] ; then
     cp $UTILROOT/ush/err_chk   .; chmod +x err_chk
     cp $UTILROOT/ush/err_exit  .; chmod +x err_exit
     cp $UTILROOT/ush/prep_step .; chmod +x prep_step
     cp $UTILROOT/ush/postmsg   .; chmod +x postmsg
     cp $UTILROOT/ush/setpdy.sh .; chmod +x setpdy.sh
   elif [[ $thismachine == 'CRAY' ]] ; then
     sh $utilscript/setup.sh
   fi

   $lscripts_emc/ex${NET}_getminmaxt_input.sh "${minmaxt_grids}"
   export err=$?; err_chk

   ic=0
   while [ $ic -le 10 ] ; do
      if [ -s $COMOUT/done_getminmaxt_input.txt ] ; then 
          sleep 10
          break
        else
          echo "run_maxt_prep_ph2.ll: sleeping for 30 seconds"
          sleep 30
      fi
   done

   export FIX${NET}=$FIXdir2
#  export COMINobsproc_urma=$COMINobsproc_urma  #just a reminder
   export COMOUT=$COMINobsproc_urma_m1         #location to write out maxtobs file
   mkdir -p $COMOUT
   $lscripts_minmaxt/ex${NET}_maxtobs.sh "${minmaxt_grids}"
   export err=$? #; err_chk

   #if obs job fails, go ahead and run other jobs.  Analysis can run without obs
   if [[ $err -ne 0 ]] ; then
       msg="WARNING: URMA maxT obs job failure for cycle ${PDY} (08Z URMA run).  MaxT analysis will run, but without obs"
       echo "$msg" | mail.py
   fi

   export FIX${NET}=$FIXdir2
   export COM_IN=$PREP_MINMAXT_DIR

   export COMOUT2p5=${MYCOMROOT}/${NET}/${envir}/urma2p5.${PDYm1}  ;  mkdir -p $COMOUT2p5 #location to write out maxT bckg and minRH for conus
   export COMOUTak=${MYCOMROOT}/${NET}/${envir}/akurma.${PDYm1}    ;  mkdir -p $COMOUTak  #location to write out maxT bckg and minRH for alaska
   export COMOUThi=${MYCOMROOT}/${NET}/${envir}/hiurma.${PDYm1}    ;  mkdir -p $COMOUThi  #location to write out maxT bckg and minRH for hawaii
   export COMOUTpr=${MYCOMROOT}/${NET}/${envir}/prurma.${PDYm1}    ;  mkdir -p $COMOUTpr  #location to write out maxT bckg and minRH for prico

   $lscripts_minmaxt/ex${NET}_maxtbg.sh "${minmaxt_grids}"
   export err=$?; err_chk

   $lscripts_minmaxt/ex${NET}_minrh.sh "${minmaxt_grids}"
   export err=$?; err_chk
fi