#!/bin/ksh

RUNDIR=_RUND_
SRCDIR=_SRCD_

mkdir -p $RUNDIR
cd $RUNDIR
rm -rf $RUNDIR/*

cp _RTPWD_/NMMB_nests/input_nmmb_regional.d01           input_domain_01
cp _RTPWD_/NMMB_nests/input_nmmb_regional.d01_nemsio    input_domain_01_nemsio
cp _RTPWD_/NMMB_nests/nmmb_rst_01_bin_0012h_00m_00.00s  restart_file_01
cp _RTPWD_/NMMB_nests/nmmb_rst_02_bin_0012h_00m_00.00s  restart_file_02
cp _RTPWD_/NMMB_nests/nmmb_rst_03_bin_0012h_00m_00.00s  restart_file_03
cp _RTPWD_/NMMB_nests/nmmb_rst_04_bin_0012h_00m_00.00s  restart_file_04
cp _RTPWD_/NMMB_nests/boco.* .
cp _RTPWD_/data/* .
cp _RTPWD_/NMMB_nests/GWD_bin_* .
cp IGBP_VEGPARM.TBL VEGPARM.TBL
cp IGBP_LANDUSE.TBL LANDUSE.TBL
cp ETAMPNEW_DATA.expanded_rain ETAMPNEW_DATA

cp $SRCDIR/tests/atmos.configure_nmm atmos.configure
cp $SRCDIR/tests/configure_file_0* .
cp configure_file_01 model_configure
ln -sf global_o3prdlos.f77 fort.28
ln -sf global_o3clim.txt fort.48

cp $SRCDIR/tests/solver_state.txt .
cp $SRCDIR/tests/nests.txt .
if [ $TS = true ]; then
  cp $SRCDIR/tests/ts_locations.nml .
fi

cp $SRCDIR/exe/NEMS.x .

if [ $SCHEDULER = 'moab' ]; then
  cp $SRCDIR/tests/nmm_msub .
  msub nmm_msub > /dev/null
elif [ $SCHEDULER = 'pbs' ]; then
  cp $SRCDIR/tests/nmm_qsub .
  qsub nmm_qsub > /dev/null
elif [ $SCHEDULER = 'lsf' ]; then
  cp $SRCDIR/tests/nmm_bsub .
  bsub < nmm_bsub > /dev/null 2>&1
fi

exit