#!/bin/sh
##########################################################
# This job obtains the initial guess from the Downscaling
# GFS output
########################################################

date
export PS4=' $SECONDS + ' 
set -x

#######################################################
# The following variable could be defined in the 
# submission script (the ecf script), if 
# not they will take the default values which is set 
# for the NCO running enviroment
#######################################################
export RUN_ENVIR=${RUN_ENVIR:-nco}

######################
# Set NET and RUN
######################
export NET=rtma
#export RUN=rtma2p5, akrtma, hirtma, prrtma, gurtma, or rurtma2p5   #RUN MUST COME FROM HIGHER LEVEL SCRIPT! /MPondeca, 26Jul2015

###########################################
# Run ${RUN}_config to get input parameters
###########################################
if [ "${RUN_ENVIR,,}" != nco ]      ### For Developers
then
  configfile=${configfile:-/meso/save/${LOGNAME}/${NET}/user/${RUN}_para_config}
  . $configfile
fi

# Note: grib_util module loaded in submission (lsf or ecFlow) script

##########################################################
# obtain unique process id (pid) and make temp directories
##########################################################
export DATA=${DATA:-${DATAROOT:?}/${jobid:?}}  #jobid ($job.$LSB_JOBID MUST BE DEFINED IN TERNS OF $RUN IN UPPER LEVEL SCRIPT /MPondeca, 26Jul2015

mkdir -p $DATA
cd $DATA

####################################
# File To Log Msgs
####################################

####################################
# Define subtypes for DBN alerts
####################################
if [ "$RUN" = rtma2p5 ]; then
   export DBN_ALERT_TYPE_SMART=${DBN_ALERT_TYPE_SMART:-RTMA_SMARTCONUS2P5_GB2}
fi


####################################
# Determine Job Output Name on System
####################################
export pgmout=${pgmout:-"OUTPUT.$$"}

export cycle=t${cyc}z 
export subcyc=${subcyc}  #Note: Must define subcyc in upper level script. Can be 00, 15, 30, or 45 /MPondeca, 30Jun2017
                         #only used for rurtma2p5

# Specify Execution Areas
export HOMErtma=${HOMErtma:-$NWROOT/rtma.${rtma_ver}}
export HOMEscript=${HOMEscript:-${HOMErtma}/scripts}
export EXECrtma=${EXECrtma:-$HOMErtma/exec}
export FIXrtma=${FIXrtma:-$HOMErtma/fix/${RUN}}
export PARMrtma=${PARMrtma:-$HOMErtma/parm}
export USHrtma=${USHrtma:-$HOMErtma/ush/${RUN}}

###########################################
# Run setpdy and initialize PDY variables
###########################################
setpdy.sh
. ./PDY

#################################################
# Set up the INPUT and OUTPUT directories
# Also prescribe paths to the input model data
#################################################
export COMIN=${COMIN:-$(compath.py ${envir}/${NET}/${rtma_ver})/${RUN}.${PDY}}
export COMOUT=${COMOUT:-$(compath.py -o ${NET}/${rtma_ver})/${RUN}.${PDY}}

mkdir -p $COMOUT

export COMINrap=${COMINrap:-$(compath.py rap/${rap_ver})}
export COMINhrrr=${COMINhrrr:-$(compath.py hrrr/${hrrr_ver})}
export COMINsubhrrr=${COMINsubhrrr:-$(compath.py hrrr/${hrrr_ver})}
export COMINnam=${COMINnam:-$(compath.py smartinit/${smartinit_ver}/nam.${PDY})}
export COMINhiresw=${COMINhiresw:-$(compath.py hiresw/${hiresw_ver})}
export COMINww3=${COMINww3:-$(compath.py gfs/${gfs_ver})}
#export gespath=${gespath:-$(compath.py ${envir}/${NET}/${rtma_ver})} #unfortunate choice of name in exrurtma2p5_getguess.sh.
                                                    #Change in next upgrade  /MPondeca, 30Jun2017
export gespath=${gespath:-$(compath.py -o ${NET}/${rtma_ver})}

export GESIN=${GESIN:-$(compath.py ${envir}/${NET}/${rtma_ver}/nwges)/${RUN}.${PDY}}

export GESIN=${GESIN:-${COMIN}}

if [[ "$RUN" = rtma2p5 || "$RUN" = akrtma  || "$RUN" = hirtma  || "$RUN" = prrtma || "$RUN" = gurtma  || "$RUN" = rtma2p5_ru ]]; then
   export use_similarity_2dvar=${use_similarity_2dvar:-.true.}
fi

env

######################
# Execute the script.
######################
$HOMErtma/scripts/${RUN}/ex${RUN}_getguess.sh
export err=$?; err_chk

cat $pgmout

postmsg "$0 of $job completed normally"

if [ "${KEEPDATA^^}" != YES ]; then
   rm -rf $DATA
fi

date