#!/bin/bash set -xa date -u ################################################################### # Set DEBUG LEVEL - modifies info in execution trace prompt string ################################################################### export DEBUG_LEVEL=${DEBUG_LEVEL=1} case $DEBUG_LEVEL in 1) export PS4='+ ${SECONDS}s + ' ;; # add seconds (this is typical case) 0) export PS4='+ ';; # don't include seconds (useful if # want to diff output from 2 runs) 2) export PS4='+ ${SECONDS}s:L$LINENO + ';; # add script line # 3) export PS4='+ ${SECONDS}s:${0##*/}:L$LINENO + ';;# add script name & line # 4) export PS4='+ ${0##*/}:L$LINENO + ';; # script name & line (no seconds) *) echo "Unrecognized DEBUG_LEVEL. Stay with current PS4 setting";; esac ######################################## # Check that required variables are set ######################################## set +x echo echo cyc is ${cyc:?"###FATAL ERROR \"cyc\" is not set"} echo envir is ${envir:?"###FATAL ERROR \"envir\" is not set"} echo job is ${job:?"###FATAL ERROR \"job\" is not set"} echo DATAROOT is ${DATAROOT:?"###FATAL ERROR \"DATAROOT\" is not set"} echo set -x ############################### # Print out version information ############################### set +x echo echo "####################################################################" echo echo "OBSPROC version is ${obsproc_ver:-not set}" echo "BUFR_DUMP version used by this job, for dump and dumplist, is \ ${bufr_dump_ver:-not set}" echo "grib_util module version used by this job is ${grib_util_ver:-not set}" if [[ $(echo $LOADEDMODULES | egrep -c "(^|:)bufr_dump/") -eq 0 ]]; then echo "bufr_dump is required but not loaded! Exiting..."; exit; fi echo echo "####################################################################" echo set -x ##################################################################### # List modules loaded for this job # On luna/surge may need to initialize the Modules package to find # the module command. Will do so for either system. ##################################################################### set +x echo echo "####################################################################" echo module list echo echo "####################################################################" echo set -x ########################### # Specify NET and RUN Name ########################### export obsNET=${obsNET:-obsproc} export NET=${NET:-rap} echo $job | grep pcyc err_p=$? echo $job | grep erly err_e=$? #echo $job | grep ehrrr #err_eh=$? if [ $err_p = 0 ]; then export RUN=${RUN:-rap_p} # Partial cycle elif [ $err_e = 0 ]; then export RUN=${RUN:-rap_e} # Early cycle #elif [ $err_eh = 0 ]; then # 10/2019; disabled for HRRRv4 # export RUN=${RUN:-rap_eh} # Early HRRR cycle else export RUN=${RUN:-rap} # Full cycle fi set +x echo echo obsNET is ${obsNET:?"###FATAL ERROR \"obsNET\" is not set"} echo NET is ${NET:?"###FATAL ERROR \"NET\" is not set"} echo RUN is ${RUN:?"###FATAL ERROR \"RUN\" is not set"} echo set -x ############################## # Specify cycle and time-mark ############################## export cycle=t${cyc}z export tmmark=tm00 ############################### # Create new working directory ############################### host=$(hostname -s) export DATA=${DATA:-$DATAROOT/${jobid}.${host}} rm -rf $DATA mkdir -p $DATA cd $DATA if [[ "$RUN_ENVIR" != nco ]]; then TMPDIR=$DATAROOT # In the event TMPDIR is reset to a temporary LSF # directory when batch jobs are submitted, set it to # $DATAROOT so ensure it remains under the user's control # (normally needed only if child script dumpjb executed) fi ###################################### # Set job log file for postmsg output ###################################### jlogfile=${jlogfile:-${DATA}/jlogfile} ###################################### # Determine Job Output Name on System ###################################### export pid=$$ export outid="LL$job" [ $envir != prod ] && export outid="LL${job}_${envir}" export jobid="${outid}.o${pid}" export pgmout="OUTPUT.${pid}" ################################################# # SENDCOM - Copy files to $COMOUT directory # SENDECF - Flag Events on ECFLOW # SENDDBN - Alert output file to TOC ################################################ export SENDCOM=${SENDCOM:-YES} export SENDECF=${SENDECF:-YES} export SENDDBN=${SENDDBN:-YES} ########################## # Specify Execution Areas ########################## # ------------------------------- # Paths for obsproc_network items # ------------------------------- export HOMEobsproc=${HOMEobsproc:\ -${PACKAGEROOT:?}/${obsNET}/${obsproc_ver:?\ "###FATAL ERROR \"obsproc_ver\" is not set"}} export SCRIPTSobsproc=${SCRIPTSobsproc:\ -$HOMEobsproc/scripts} # ---------------------------------------------------- # Paths for dump and bufr_dumplist items # variables predefined when bufr_dump module is loaded # ---------------------------------------------------- export USHbufr_dump=${USHbufr_dump:-$HOMEbufr_dump/ush} export FIXbufr_dump=${FIXbufr_dump:-$HOMEbufr_dump/fix} # NOTE: path to dump executables defaults to $HOMEbufr_dump/exec in dumpjb # directory path to data dump script executed in model script # ----------------------------------------------------------- export ushscript_dump=${ushscript_dump:-$USHbufr_dump} # --------------------------------------------------------- # Paths for combined obsproc and dump items # --------------------------------------------------------- # directory paths to SSMI dump re-processing executed in bufr_dump_obs # -------------------------------------------------------------------- export EXECPREP=${EXECPREP:-$HOMEbufr_dump/exec} export PARMPREP=${PARMPREP:-$HOMEobsproc/parm} export FIXPREP=${FIXPREP:-$HOMEbufr_dump/fix} # also path to expanded NAM # domain mask file # directory paths to ERS, QuikSCAT & ASCAT dump re-processing executed in # bufr_dump_obs # ----------------------------------------------------------------------- export EXECWAVE=${EXECWAVE:-$HOMEbufr_dump/exec} export PARMWAVE=${PARMWAVE:-$HOMEobsproc/parm} export FIXWAVE=${FIXWAVE:-$HOMEbufr_dump/fix} # directory paths to SSMI, TRMM & WindSAT dump re-processing executed in # bufr_dump_obs # ---------------------------------------------------------------------- export EXECbufr=${EXECbufr:-$HOMEbufr_dump/exec} export PARMbufr=${PARMbufr:-$HOMEobsproc/parm} export FIXbufr=${FIXbufr:-$HOMEbufr_dump/fix} # --------------------------- # Paths for non-obsproc items # --------------------------- # TANK is root directory path to observational database used in dumpjb # -------------------------------------------------------------------- export DCOMROOT=${DCOMROOT:-/lfs/h1/ops/prod/dcom} export TANK=${TANK:-${DCOMROOT}} # directory path to imssnow grib files used in model script # --------------------------------------------------------- export TANK_GRIBFLDS=${TANK_GRIBFLDS:-${DCOMROOT}} ######################################################################### # Add some prod utilities to working directory ######################################################################### echo "step ############# break ##############################" > ./break cp $UTILROOT/ush/err_chk .; chmod +x err_chk cp $UTILROOT/ush/err_exit .; chmod +x err_exit cp $UTILROOT/ush/prep_step .; chmod +x prep_step cp $UTILROOT/ush/postmsg .; chmod +x postmsg cp $UTILROOT/ush/setpdy.sh .; chmod +x setpdy.sh ########################################## # Run setpdy and initialize PDY variables ########################################## ./setpdy.sh . PDY ######################### # Define COM directories ######################### export COMIN_ROOT=${COMIN_ROOT:-${COMROOT:-""}} if [[ "$RUN_ENVIR" == nco ]]; then export COMIN=${COMIN:-$(compath.py ${envir}/${obsNET}/${obsproc_ver}/${RUN}.${PDY})} export COMOUT=${COMOUT:-$(compath.py -o ${obsNET}/${obsproc_ver}/${RUN}.${PDY})} mkdir -m 775 -p $COMOUT else export COMIN=${COMIN:-${COMIN_ROOT:?}/${obsNET}/${obsproc_ver}/${RUN}.${PDY}} # COMOUT_ROOT for developers defaults to unique $DATA/com directory as root to # prevent job from writing into a non-unique directory that might already have # output in it from a previous checkout run for the same cycle # ----------------------------------------------------------------------------- export COMOUT_ROOT=${COMOUT_ROOT:-${DATA}/com} export COMOUT=${COMOUT:-${COMOUT_ROOT:?}/${obsNET}/${obsproc_ver}/${RUN}.${PDY}} mkdir -m 755 -p $COMOUT fi ######################################################################## # SETUP RAP (full cycle), RAP_P (partial cycle), RAP_E (early cycle) or # RAP_EH (early HRRR cycle) DATA DUMP PROCESSING VARIABLES # 10/2019 rap_eh disabled for HRRRv4 ######################################################################## ######################################################### # Specify variables specific to this execution of script ######################################################### if [ $RUN = rap_p ]; then #if [ $RUN = rap_p -o $RUN = rap_eh ]; then # 10/2019; rap_eh disabled for HRRRv4 export PROCESS_GRIBFLDS=${PROCESS_GRIBFLDS:-NO} # defaults to NO in # partial cycle jobs else export PROCESS_GRIBFLDS=${PROCESS_GRIBFLDS:-YES} # defaults to YES in # full and early cycle jobs fi export PROCESS_DUMP=${PROCESS_DUMP:-YES} export prepssmi=NO # "spssmi" reprocessed dump no longer generated # since SSM/I instrument on F-13 has failed (11/2009) export KEEP_NEARDUP_ACFT=${KEEP_NEARDUP_ACFT:-NO} # toss near-dupl. acft rpts # LALO is set if doing geographic dumping # Expanded NAM domain: 0.5 degree mask nam_expdomain_halfdeg_imask.gbl export LALO=${LALO:-"F$FIXPREP/nam_expdomain_halfdeg_imask.gbl"} # POE must be set to on if running poe ###export POE=on # -- or -- BACK must be set to on if running background shells export BACK=on # "on" is default # 10/2019; rap_eh disabled for HRRRv4 #if [ $RUN = rap_eh ]; then # # Early HRRR cycle jobs will dump only data in DUMP_group6 ("nexrad") # ------------------------------------------------------------------- # export num_DUMP_group=7 # test to make sure job & model scripts are in sync # export DUMP_group1=NO # export DUMP_group2=NO # export DUMP_group3=NO # export DUMP_group4=NO # export DUMP_group5=NO # export DUMP_group6=YES # export DUMP_group7=NO # #fi env ##################### # Execute the script ##################### $SCRIPTSobsproc/exrap_dump.sh err_rap_dump=$? eval err_${RUN}_dump=${err_rap_dump} [[ $err_rap_dump -ne 0 ]] && $DATA/err_exit echo "$SITE `hostname` -- `date -u`" > $COMOUT/where_${cycle}_${RUN}_dump_ran > $COMOUT/obsproc_version_for_${cycle}_${RUN}_dump_run [ -n "$obsproc_ver" ] && \ echo "OBSPROC version is $obsproc_ver" >> \ $COMOUT/obsproc_version_for_${cycle}_${RUN}_dump_run [ -n "$bufr_dump_ver" ] && \ echo "BUFR_DUMP version used by this job is $bufr_dump_ver" >> \ $COMOUT/obsproc_version_for_${cycle}_${RUN}_dump_run echo "Version of module \"grib_util\" used by this job is $grib_util_ver" \ >> $COMOUT/obsproc_version_for_${cycle}_${RUN}_dump_run if [ "$KEEPDATA" != YES ]; then cd $DATAROOT rm -rf $DATA fi date -u exit