#!/bin/bash set -xa date -u ################################################################### # Set DEBUG LEVEL - modifies info in execution trace prompt string ################################################################### export DEBUG_LEVEL=${DEBUG_LEVEL=1} case $DEBUG_LEVEL in 1) export PS4='+ ${SECONDS}s + ' ;; # add seconds (this is typical case) 0) export PS4='+ ';; # don't include seconds (useful if # want to diff output from 2 runs) 2) export PS4='+ ${SECONDS}s:L$LINENO + ';; # add script line # 3) export PS4='+ ${SECONDS}s:${0##*/}:L$LINENO + ';;# add script name & line # 4) export PS4='+ ${0##*/}:L$LINENO + ';; # script name & line (no seconds) *) echo "Unrecognized DEBUG_LEVEL. Stay with current PS4 setting";; esac ######################################## # Check that required variables are set ######################################## set +x echo echo cyc is ${cyc:?"###FATAL ERROR \"cyc\" is not set"} echo tmmark is ${tmmark:?"###FATAL ERROR \"tmmark\" is not set"} echo envir is ${envir:?"###FATAL ERROR \"envir\" is not set"} echo job is ${job:?"###FATAL ERROR \"job\" is not set"} echo DATAROOT is ${DATAROOT:?"###FATAL ERROR \"DATAROOT\" is not set"} echo set -x ################################ # Print out version information ################################ set +x echo echo "####################################################################" echo echo "OBSPROC version is ${obsproc_ver:-not set}" echo "BUFR_DUMP version used by this job, for dump and dumplist, is" \ "${bufr_dump_ver:-not set}" echo "grib_util module version used by this job is ${grib_util_ver:-not set}" if [[ $(echo $LOADEDMODULES | egrep -c "(^|:)bufr_dump/") -eq 0 ]]; then echo "bufr_dump is required but not loaded! Exiting..."; exit; fi echo echo "####################################################################" echo set -x ##################################################################### # List modules loaded for this job ##################################################################### set +x echo echo "####################################################################" echo module list echo echo "####################################################################" echo set -x ###################### # Specify NET and RUN ###################### export obsNET=${obsNET:-obsproc} export NET=${NET:-nam} export RUN=${RUN:-nam} set +x echo echo obsNET is ${obsNET:?"###FATAL ERROR \"obsNET\" is not set"} echo NET is ${NET:?"###FATAL ERROR \"NET\" is not set"} echo RUN is ${RUN:?"###FATAL ERROR \"RUN\" is not set"} echo set -x ################ # Specify cycle ################ export cycle=t${cyc}z ############################### # Create new working directory ############################### jobid=${jobid:-${job}.$(hostname -s).$$} export DATA=${DATA:-$DATAROOT/${jobid}} rm -rf $DATA mkdir -p $DATA cd $DATA export pgmout=OUTPUT.$$ if [[ "$RUN_ENVIR" != nco ]]; then TMPDIR=$DATAROOT # In the event TMPDIR is reset to a temporary LSF # directory when batch jobs are submitted, set it to # $DATAROOT so ensure it remains under the user's control # (normally needed only if child script dumpjb executed) fi ###################################### # Set job log file for postmsg output ###################################### jlogfile=${jlogfile:-${DATA}/jlogfile} ################################################# # SENDCOM - Copy files to $COMOUT directory # SENDECF - Flag Events on ECFLOW # SENDDBN - Alert output file to TOC ################################################# export SENDCOM=${SENDCOM:-YES} export SENDECF=${SENDECF:-YES} export SENDDBN=${SENDDBN:-YES} ########################## # Specify Execution Areas ########################## # ------------------------------- # Paths for obsproc items # ------------------------------- export HOMEobsproc=${HOMEobsproc:\ -${PACKAGEROOT:?}/${obsNET}/${obsproc_ver:?\ "###FATAL ERROR \"obsproc_ver\" is not set"}} export SCRIPTSobsproc=${SCRIPTSobsproc:\ -$HOMEobsproc/scripts} # --------------------------------------------------------------------- # Paths for dump and bufr_dumplist items # Default variables are pre-defined when the bufr_dump module is loaded. # ---------------------------------------------------------------------- export USHbufr_dump=${USHbufr_dump:-$HOMEbufr_dump/ush} export FIXbufr_dump=${FIXbufr_dump:=$HOMEbufr_dump/fix} # NOTE: path to dump executables defaults to $HOMEbufr_dump/exec in dumpjb # directory path to data dump script executed in model script # ----------------------------------------------------------- export ushscript_dump=${ushscript_dump:-$USHbufr_dump} # --------------------------------------------------------- # Paths for combined obsproc and dump items # --------------------------------------------------------- # directory paths to SSMI dump re-processing executed in bufr_dump_obs # -------------------------------------------------------------------- export EXECPREP=${EXECPREP:-$HOMEbufr_dump/exec} export PARMPREP=${PARMPREP:-$HOMEobsproc/parm} export FIXPREP=${FIXPREP:-$HOMEbufr_dump/fix} # also path to expanded NAM # domain mask file # directory paths to ERS, QuikSCAT & ASCAT dump re-processing executed in # bufr_dump_obs # ----------------------------------------------------------------------- export EXECWAVE=${EXECWAVE:-$HOMEbufr_dump/exec} export PARMWAVE=${PARMWAVE:-$HOMEobsproc/parm} export FIXWAVE=${FIXWAVE:-$HOMEbufr_dump/fix} # directory paths to SSMI & WindSAT dump re-processing executed in bufr_dump_obs # ------------------------------------------------------------------------------ export EXECbufr=${EXECbufr:-$HOMEbufr_dump/exec} export PARMbufr=${PARMbufr:-$HOMEobsproc/parm} export FIXbufr=${FIXbufr:-$HOMEbufr_dump/fix} # --------------------------- # Paths for non-obsproc items # --------------------------- # TANK is root directory path to observational database used in dumpjb # -------------------------------------------------------------------- export DCOMROOT=${DCOMROOT:-/lfs/h1/ops/prod/dcom} export TANK=${TANK:-${DCOMROOT}} # TANK_GRIBFLDS is root directory path to imssnow grib file used in # model script # --------------------------------------------------------------------------- export TANK_GRIBFLDS=${TANK_GRIBFLDS:-${DCOMROOT}} ######################################################################### # Add some prod utilities to working directory ######################################################################### echo "step ############# break ##############################" > ./break cp $UTILROOT/ush/err_chk .; chmod +x err_chk cp $UTILROOT/ush/err_exit .; chmod +x err_exit cp $UTILROOT/ush/prep_step .; chmod +x prep_step cp $UTILROOT/ush/postmsg .; chmod +x postmsg cp $UTILROOT/ush/setpdy.sh .; chmod +x setpdy.sh ########################################## # Run setpdy and initialize PDY variables ########################################## set +x; echo -e "\n---> path to setpdy.sh below is: `which setpdy.sh`"; set -x if [ -z "$PDY" ]; then if test "$cyc" = "12" then if test "$tmmark" != "tm00" then # Since the 12Z catch-up cycle (tm06 through tm01) jobs run before the 12 UTC # PROD_SETUP job runs we need to use the ${COMDATEROOT}/date/t00z file for our PDY export cycle=t00z setpdy.sh . $DATA/PDY export cycle=t12z setpdy.sh . $DATA/PDY else # The 12Z on-time cycle (tm00) runs after the 12 UTC PROD_SETUP job setpdy.sh . $DATA/PDY fi elif test "$cyc" = "00" then if test "$tmmark" != "tm00" then # Check to see if we are running a 00Z catch-up cycle (tm06 through tm01) job # prior to run of 00 UTC PROD_SETUP - if so, update PDY by 1-day setpdy.sh . $DATA/PDY edate=`cat ${COMDATEROOT}/date/t12z | cut -c7-14` if [ $edate -eq $PDY ] then export PDY=`$UTILROOT/ush/finddate.sh $PDY d+1` setpdy.sh . $DATA/PDY fi else # The 00Z on-time cycle (tm00) runs after the 00 UTC PROD_SETUP job setpdy.sh . $DATA/PDY fi else # The 06 & 18Z jobs at all cycles after the 00 & 12 UTC PROD_SETUP jobs, resp. setpdy.sh . $DATA/PDY fi else # If PDY was previously specified (checkout only) fall through to here setpdy.sh . $DATA/PDY fi ######################### # Define COM directories ######################### export COMIN_ROOT=${COMIN_ROOT:-${COMROOT:-""}} if [[ "$RUN_ENVIR" == nco ]]; then export COMIN=${COMIN:-$(compath.py ${envir}/${obsNET}/${obsproc_ver}/${RUN}.${PDY})} export COMOUT=${COMOUT:-$(compath.py -o ${obsNET}/${obsproc_ver}/${RUN}.${PDY})} mkdir -m 775 -p $COMOUT else export COMIN=${COMIN:-${COMIN_ROOT:?}/${obsNET}/${obsproc_ver}/${RUN}.${PDY}} # COMOUT_ROOT for developers defaults to unique $DATA/com directory as root to # prevent job from writing into a non-unique directory that might already have # output in it from a previous checkout run for the same cycle # ----------------------------------------------------------------------------- export COMOUT_ROOT=${COMOUT_ROOT:-${DATA}/com} export COMOUT=${COMOUT:-${COMOUT_ROOT:?}/${obsNET}/${obsproc_ver}/${RUN}.${PDY}} mkdir -m 755 -p $COMOUT fi ########################################### # SETUP NAM DATA DUMP PROCESSING VARIABLES ########################################### ######################################################### # Specify variables specific to this execution of script ######################################################### export JOB_NUMBER=1 # The grib fields are copied in the tm06 job only # (done here, not in DUMP2 job) # (Note: It is believed these are now used only by the RCDAS, via a file copy. # Once the RCDAS is modified to copy these files itself from /dcom, this # prcessing can be removed here.) if [ "$tmmark" = 'tm06' ]; then export PROCESS_GRIBFLDS=${PROCESS_GRIBFLDS:-YES} else export PROCESS_GRIBFLDS=${PROCESS_GRIBFLDS:-NO} fi export PROCESS_DUMP=${PROCESS_DUMP:-YES} export prepssmi=NO # "spssmi" reprocessed dump no longer generated # since SSM/I instrument on F-13 has failed (11/2009) export KEEP_NEARDUP_ACFT=${KEEP_NEARDUP_ACFT:-NO} # toss near-dupl. acft rpts # LALO is set if doing geographic dumping # Expanded NAM domain: 0.5 degree mask nam_expdomain_halfdeg_imask.gbl export LALO=${LALO:-"F$FIXPREP/nam_expdomain_halfdeg_imask.gbl"} export BACK=off # background threads not allowed env ##################### # Execute the script ##################### $SCRIPTSobsproc/exnam_dump.sh eval err_${RUN}_dump=$? eval [[ \$err_${RUN}_dump -ne 0 ]] && $DATA/err_exit echo "$SITE `hostname` -- `date -u`" > \ $COMOUT/where_${tmmark}_${cycle}_${RUN}_dump_ran > $COMOUT/obsproc_version_for_${tmmark}_${cycle}_${RUN}_dump_run [ -n "$obsproc_ver" ] && \ echo "OBSPROC version is $obsproc_ver" >> \ $COMOUT/obsproc_version_for_${tmmark}_${cycle}_${RUN}_dump_run [ -n "$bufr_dump_ver" ] && \ echo "BUFR_DUMP version used by this job is $bufr_dump_ver" >> \ $COMOUT/obsproc_version_for_${tmmark}_${cycle}_${RUN}_dump_run echo "Version of module \"grib_util\" used by this job is $grib_util_ver" \ >> $COMOUT/obsproc_version_for_${tmmark}_${cycle}_${RUN}_dump_run if [ "$KEEPDATA" != YES ]; then cd $DATAROOT rm -rf $DATA fi date -u exit