#!/bin/bash set -xa date -u ################################################################### # Set DEBUG LEVEL - modifies info in execution trace prompt string ################################################################### export DEBUG_LEVEL=${DEBUG_LEVEL:-1} case $DEBUG_LEVEL in 1) export PS4='+ ${SECONDS}s + ' ;; # add seconds (this is typical case) 0) export PS4='+ ';; # don't include seconds (useful if # want to diff output from 2 runs) 2) export PS4='+ ${SECONDS}s:L$LINENO + ';; # add script line # 3) export PS4='+ ${SECONDS}s:${0##*/}:L$LINENO + ';;# add script name & line # 4) export PS4='+ ${0##*/}:L$LINENO + ';; # script name & line (no seconds) *) echo "Unrecognized DEBUG_LEVEL. Stay with current PS4 setting";; esac ######################################## # Check that required variables are set ######################################## set +x echo echo cyc is ${cyc:?"###FATAL ERROR \"cyc\" is not set"} echo envir is ${envir:?"###FATAL ERROR \"envir\" is not set"} echo job is ${job:?"###FATAL ERROR \"job\" is not set"} echo DATAROOT is ${DATAROOT:?"###FATAL ERROR \"DATAROOT\" is not set"} echo HOMEbufr_dump is ${HOMEbufr_dump:?"###FATAL ERROR \"HOMEbufr_dump\" is not set"} echo set -x ################################ # Print out version information ################################ set +x echo "####################################################################" echo echo "OBSPROC version is ${obsproc_ver:-not set}" echo "BUFR_DUMP version used by this job, for dumplist, is" \ "${bufr_dump_ver:-not set}" echo if [[ $(echo $LOADEDMODULES | egrep -c "(^|:)bufr_dump/") -eq 0 ]]; then echo "bufr_dump is required but not loaded! Exiting..."; exit; fi echo echo "####################################################################" echo set -x echo "####################################################################" echo module list echo echo "####################################################################" echo set -x ###################### # Specify NET and RUN ###################### export obsNET=${obsNET:-obsproc} export NET=${NET:-gfs} echo $job | grep gfs err_gfs=$? echo $job | grep gdas err_gdas=$? if [ $err_gfs = 0 ]; then export RUN=${RUN:-gfs} # GFS elif [ $err_gdas = 0 ]; then export RUN=${RUN:-gdas} # GDAS fi set +x echo echo obsNET is ${obsNET:?"###FATAL ERROR \"obsNET\" is not set"} echo NET is ${NET:?"###FATAL ERROR \"NET\" is not set"} echo RUN is ${RUN:?"###FATAL ERROR \"RUN\" is not set"} echo set -x ############################## # Specify cycle and time-mark ############################## export cycle=t${cyc}z export tmmark=tm00 ############################### # Create new working directory ############################### jobid=${jobid:-${job}.$(hostname -s).$$} export DATA=${DATA:-$DATAROOT/${jobid}} rm -rf $DATA mkdir -p $DATA cd $DATA export pgmout=OUTPUT.$$ ###################################### # Set job log file for postmsg output ###################################### jlogfile=${jlogfile:-${DATA}/jlogfile} ############################################################################### # SENDCOM - Copy files to $COMOUT directory # SENDECF - Flag Events on ECFLOW # SENDDBN - Alert output file to TOC # SENDSDM - Send files to SDM (via email and/or printer in bufr_datacount.sh) ############################################################################### export SENDCOM=${SENDCOM:-YES} export SENDECF=${SENDECF:-YES} export SENDDBN=${SENDDBN:-YES} export SENDSDM=${SENDSDM:-YES} [[ "$envir" != prod ]] && export SENDSDM=NO # parallel , not send email to SDM ########################## # Specify Execution Areas ########################## # ------------------------ # Paths for obsproc items # ------------------------ export HOMEobsproc=${HOMEobsproc:-${PACKAGEROOT:?}/${obsNET}/${obsproc_ver}:?\ "###FATAL ERROR \"obsproc_ver\" is not set"} export SCRIPTSobsproc=${SCRIPTSobsproc:-$HOMEobsproc/scripts} export EXECobsproc=${EXECobsproc:-$HOMEobsproc/exec} export USHobsproc=${USHobsproc:-$HOMEobsproc/ush} # ---------------------------------------------------------------------- # Paths for bufr_dumplist items # Default variables are pre-defined when the bufr_dump module is loaded. # ---------------------------------------------------------------------- export FIXbufr_dump=${FIXbufr_dump:-$HOMEbufr_dump/fix} ######################################################################### # Add some prod utilities to working directory ######################################################################### echo "step ############# break ##############################" > ./break cp $UTILROOT/ush/err_chk .; chmod +x err_chk cp $UTILROOT/ush/err_exit .; chmod +x err_exit cp $UTILROOT/ush/prep_step .; chmod +x prep_step cp $UTILROOT/ush/postmsg .; chmod +x postmsg cp $UTILROOT/ush/setpdy.sh .; chmod +x setpdy.sh ########################################## # Run setpdy and initialize PDY variables ########################################## ./setpdy.sh . PDY ######################### # Define COM directories ######################### export COMIN_ROOT=${COMIN_ROOT:-${COMROOT:-""}} export COMPONENT=${COMPONENT:-atmos} if [[ "$RUN_ENVIR" == nco ]]; then export COMIN=${COMIN:-$(compath.py ${envir}/${obsNET}/${obsproc_ver}/${RUN}.${PDY}/${cyc}/${COMPONENT})} export COMOUT=${COMOUT:-$(compath.py -o ${obsNET}/${obsproc_ver}/${RUN}.${PDY}/${cyc}/${COMPONENT})} mkdir -m 775 -p $COMOUT # The following are used by $PROCESS_REMOREST_dm2 when it is YES # -------------------------------------------------------------- export COMINm2=${COMINm2:-$(compath.py ${envir}/${obsNET}/${obsproc_ver}/${RUN}.${PDYm2}/${cyc}/${COMPONENT})} export COMOUTm2=${COMOUTm2:-$(compath.py -o ${obsNET}/${obsproc_ver}/${RUN}.${PDYm2}/${cyc}/${COMPONENT})} else export COMIN=${COMIN:-${COMIN_ROOT:?}/${obsNET}/${obsproc_ver}/${RUN}.${PDY}/${cyc}/${COMPONENT}} # COMOUT_ROOT for developers defaults to unique $DATA/com directory as root to # prevent job from writing into a non-unique directory that might already have # output in it from a previous checkout run for the same cycle # ----------------------------------------------------------------------------- export COMOUT_ROOT=${COMOUT_ROOT:-${DATA}/com} export COMOUT=${COMOUT:-${COMOUT_ROOT}/${obsNET}/${obsproc_ver}/${RUN}.${PDY}/${cyc}/${COMPONENT}} mkdir -m 755 -p $COMOUT # The following are used by $PROCESS_REMOREST_dm2 when it is YES # -------------------------------------------------------------- export COMINm2=${COMINm2:-${COMIN_ROOT:?}/${obsNET}/${obsproc_ver}/${RUN}.${PDYm2}/${cyc}/${COMPONENT}} export COMOUTm2=${COMOUTm2:-${COMOUT_ROOT}/${obsNET}/${obsproc_ver}/${RUN}.${PDYm2}/${cyc}/${COMPONENT}} mkdir -m 755 -p $COMOUTm2 fi # comin and comin_m1 are paths to dump status files for bufr_avgdata.sh export comin=${comin:-$(compath.py ${envir}/${obsNET}/${obsproc_ver}/${RUN}.${PDY})/${cyc}/${COMPONENT}} export comin_m1=${comin_m1:-$(compath.py ${envir}/${obsNET}/${obsproc_ver}/${RUN}.${PDYm1})/${cyc}/${COMPONENT}} # --------------------------- # Paths for non-obsproc items # --------------------------- # directory path to data count/alert processing executed in bufr_datacount.sh # and data count averaging executed in model script and in bufr_avgdata.sh # --------------------------------------------------------------------------- export HOMEarch=${HOMEarch:-$(compath.py ${envir}/$obsNET/${obsproc_ver})/sdm_rtdm/${NET}} # .. AVGDarch_IN is directory path containing 30-day avg files (read by # bufr_datacount.sh) # ------------------------------------------------------------------ # .. AVGDarch_OUT is directory path for avg tables output by model script # -------------------------------------------------------------------- if [[ "$RUN_ENVIR" == nco ]]; then export AVGDarch_IN=$HOMEarch/avgdata export AVGDarch_OUT=$HOMEarch/avgdata if [ ! -d $AVGDarch_OUT ]; then mkdir -p $AVGDarch_OUT fi else [ -n "$HOMEarch" ] && HOMEarch_avgdata=$HOMEarch/avgdata export AVGDarch_IN=\ ${AVGDarch_IN:-${HOMEarch_avgdata:-${COMIN_ROOT:?}/${obsNET}/${obsproc_ver}/sdm_rtdm/${RUN}/avgdata}} export AVGDarch_OUT=${AVGDarch_OUT:-${COMOUT_ROOT:?}/${obsNET}/${obsproc_ver}/sdm_rtdm/${RUN}/avgdata} mkdir -p $AVGDarch_OUT fi # .. OBCNTarch is directory path to write new status files to & read all status # files from {can WRITE to this location only if COPY=YES (the default)} # -------------------------------------------------------------------------- export OBCNTarch=${OBCNTarch:-$HOMEarch/obcount_30day} # .. ALERTL is directory for alert log files output by bufr_datacount.sh # ------------------------------------------------------------------- if [[ "$RUN_ENVIR" == nco ]]; then if [[ ${envir} == prod ]]; then export ALERTL=${ALERTL:-${COMROOT:?}/logs/alertlog} else export ALERTL=${ALERTL:-${COMROOT:?}/logs/alertlog} fi mkdir -p $ALERTL else # developer export ALERTL=${ALERTL:-${COMOUT_ROOT:?}/logs/alertlog} mkdir -p $ALERTL fi ######################################################## # SETUP GDAS OR GFS DATA DUMP POST PROCESSING VARIABLES ######################################################## ######################################################### # Specify variables specific to this execution of script ######################################################### export PROCESS_DATACOUNTS=${PROCESS_DATACOUNTS:-YES} # normally runs export PROCESS_REMOREST=${PROCESS_REMOREST:-YES} # normally runs export PROCESS_UNBLKBUFR=${PROCESS_UNBLKBUFR:-NO} # normally does not run export PROCESS_LISTERS=${PROCESS_LISTERS:-YES} # normally runs # Data count average tables are generated in the 18Z run only if [ "$cyc" = '18' ]; then export PROCESS_AVGTABLES=${PROCESS_AVGTABLES:-YES} else export PROCESS_AVGTABLES=${PROCESS_AVGTABLES:-NO} fi env [ $RUN = gdas ] && export NET=gdas ##################### # Execute the script ##################### $SCRIPTSobsproc/exdump_post.sh eval err_${RUN}_dump_post=$? eval [[ \$err_${RUN}_dump_post -ne 0 ]] && $DATA/err_exit echo "$SITE `hostname` -- `date -u`" > $COMOUT/where_${cycle}_${RUN}_dump_post_ran > $COMOUT/obsproc_version_for_${cycle}_${RUN}_dump_post_run [ -n "$obsproc_ver" ] && \ echo "OBSPROC version is $obsproc_ver" >> \ $COMOUT/obsproc_version_for_${cycle}_${RUN}_dump_post_run [ -n "$bufr_dump_ver" ] && \ echo "BUFR_DUMP version used by this job is $bufr_dump_ver" >> \ $COMOUT/obsproc_version_for_${cycle}_${RUN}_dump_post_run if [ "$KEEPDATA" != YES ]; then cd $DATAROOT rm -rf $DATA fi date -u exit