/* This is part of the netCDF package. Copyright 2005-2011 University Corporation for Atmospheric Research/Unidata See COPYRIGHT file for conditions of use. Test HDF5 file code. These are not intended to be exhaustive tests, but they use HDF5 the same way that netCDF-4 does, so if these tests don't work, than netCDF-4 won't work either. */ #include "h5_err_macros.h" #include #include #include #define FILE_NAME "tst_h_dimscales4.h5" #define DIMSCALE_NAME "AAA_dimscale" #define VAR1_NAME "Watson" #define VAR2_NAME "Holmes" #define VAR3_NAME "Moriarty" #define NDIMS 1 #define DIM_LEN 1 #define NAME_ATTRIBUTE "dimscale_name_attribute" #define DIMSCALE_LABEL "dimscale_label" #define STR_LEN 255 #define NC_MAX_NAME STR_LEN #define NC_EHDFERR 255 #define DIM_WITHOUT_VARIABLE "This is a netCDF dimension but not a netCDF variable." /* typedef struct { */ /* unsigned long fileno; /\*file number *\/ */ /* haddr_t objno; /\*object number *\/ */ /* } HDF5_OBJID_T; */ struct nc_hdf5_link_info { char name[STR_LEN]; H5I_type_t obj_type; }; static herr_t visit_link(hid_t g_id, const char *name, const H5L_info_t *info, void *op_data) { /* A positive return value causes the visit iterator to immediately * return that positive value, indicating short-circuit * success. The iterator can be restarted at the next group * member. */ int ret = 1; hid_t id; strncpy(((struct nc_hdf5_link_info *)op_data)->name, name, NC_MAX_NAME); /* Open this critter. */ if ((id = H5Oopen_by_addr(g_id, info->u.address)) < 0) return NC_EHDFERR; /* Is this critter a group, type, data, attribute, or what? */ if ((((struct nc_hdf5_link_info *)op_data)->obj_type = H5Iget_type(id)) < 0) ret = NC_EHDFERR; /* Close the critter to release resouces. */ if (H5Oclose(id) < 0) return NC_EHDFERR; return ret; } herr_t alien_visitor(hid_t did, unsigned dim, hid_t dsid, void *visitor_data) { char name1[STR_LEN]; H5G_stat_t statbuf; HDF5_OBJID_T *objid = visitor_data; /* This should get "/var1", the name of the dataset that the scale * is attached to. */ /*if (H5Iget_name(did, name1, STR_LEN) < 0) ERR;*/ /* printf("visiting did 0x%x dim %d dsid 0x%x name of did %s \n", did, dim, dsid, name1);*/ /* Get more info on the dimscale object.*/ if (H5Gget_objinfo(dsid, ".", 1, &statbuf) < 0) ERR; objid->fileno[0] = statbuf.fileno[0]; objid->objno[0] = statbuf.objno[0]; objid->fileno[1] = statbuf.fileno[1]; objid->objno[1] = statbuf.objno[1]; /* printf("for dsid: statbuf.fileno = %d statbuf.objno = %d\n", statbuf.fileno, statbuf.objno);*/ if (H5Gget_objinfo(did, ".", 1, &statbuf) < 0) ERR; /* printf("for did: statbuf.fileno = %d statbuf.objno = %d\n", statbuf.fileno, statbuf.objno);*/ return 0; } int main() { printf("\n*** Checking HDF5 dimscales detach.\n"); printf("*** Creating a file with two vars with one dimension scale..."); { hid_t fileid, grpid, spaceid, var1_id, var2_id, dimscaleid, cparmsid; hid_t fcpl_id, fapl_id, create_propid, access_propid; hsize_t dims[NDIMS] = {DIM_LEN}; char dimscale_wo_var[STR_LEN]; float data = 42; /* Create file. */ if ((fapl_id = H5Pcreate(H5P_FILE_ACCESS)) < 0) ERR; if (H5Pset_fclose_degree(fapl_id, H5F_CLOSE_STRONG)) ERR; if (H5Pset_cache(fapl_id, 0, CHUNK_CACHE_NELEMS, CHUNK_CACHE_SIZE, CHUNK_CACHE_PREEMPTION) < 0) ERR; if (H5Pset_libver_bounds(fapl_id, H5F_LIBVER_18, H5F_LIBVER_18) < 0) ERR; if ((fcpl_id = H5Pcreate(H5P_FILE_CREATE)) < 0) ERR; if (H5Pset_link_creation_order(fcpl_id, (H5P_CRT_ORDER_TRACKED | H5P_CRT_ORDER_INDEXED)) < 0) ERR; if (H5Pset_attr_creation_order(fcpl_id, (H5P_CRT_ORDER_TRACKED | H5P_CRT_ORDER_INDEXED)) < 0) ERR; if ((fileid = H5Fcreate(FILE_NAME, H5F_ACC_TRUNC, fcpl_id, fapl_id)) < 0) ERR; if (H5Pclose(fapl_id) < 0) ERR; if (H5Pclose(fcpl_id) < 0) ERR; if ((grpid = H5Gopen2(fileid, "/", H5P_DEFAULT)) < 0) ERR; /* Create dimension scale. */ if ((create_propid = H5Pcreate(H5P_DATASET_CREATE)) < 0) ERR; if (H5Pset_attr_creation_order(create_propid, H5P_CRT_ORDER_TRACKED| H5P_CRT_ORDER_INDEXED) < 0) ERR; if ((spaceid = H5Screate_simple(1, dims, dims)) < 0) ERR; if ((dimscaleid = H5Dcreate1(grpid, DIMSCALE_NAME, H5T_IEEE_F32BE, spaceid, create_propid)) < 0) ERR; if (H5Sclose(spaceid) < 0) ERR; if (H5Pclose(create_propid) < 0) ERR; sprintf(dimscale_wo_var, "%s%10d", DIM_WITHOUT_VARIABLE, DIM_LEN); if (H5DSset_scale(dimscaleid, dimscale_wo_var) < 0) ERR; /* Create a variable that uses this dimension scale. */ if ((access_propid = H5Pcreate(H5P_DATASET_ACCESS)) < 0) ERR; if (H5Pset_chunk_cache(access_propid, CHUNK_CACHE_NELEMS, CHUNK_CACHE_SIZE, CHUNK_CACHE_PREEMPTION) < 0) ERR; if ((create_propid = H5Pcreate(H5P_DATASET_CREATE)) < 0) ERR; if (H5Pset_fill_value(create_propid, H5T_NATIVE_FLOAT, &data) < 0) ERR; if (H5Pset_layout(create_propid, H5D_CONTIGUOUS) < 0) ERR; if (H5Pset_attr_creation_order(create_propid, H5P_CRT_ORDER_TRACKED| H5P_CRT_ORDER_INDEXED) < 0) ERR; if ((spaceid = H5Screate_simple(NDIMS, dims, dims)) < 0) ERR; if ((var1_id = H5Dcreate2(grpid, VAR1_NAME, H5T_NATIVE_FLOAT, spaceid, H5P_DEFAULT, create_propid, access_propid)) < 0) ERR; if (H5Pclose(create_propid) < 0) ERR; if (H5Pclose(access_propid) < 0) ERR; if (H5Sclose(spaceid) < 0) ERR; if (H5DSattach_scale(var1_id, dimscaleid, 0) < 0) ERR; /* Create another variable that uses this dimension scale. */ if ((access_propid = H5Pcreate(H5P_DATASET_ACCESS)) < 0) ERR; if (H5Pset_chunk_cache(access_propid, CHUNK_CACHE_NELEMS, CHUNK_CACHE_SIZE, CHUNK_CACHE_PREEMPTION) < 0) ERR; if ((create_propid = H5Pcreate(H5P_DATASET_CREATE)) < 0) ERR; if (H5Pset_fill_value(create_propid, H5T_NATIVE_FLOAT, &data) < 0) ERR; if (H5Pset_layout(create_propid, H5D_CONTIGUOUS) < 0) ERR; if (H5Pset_attr_creation_order(create_propid, H5P_CRT_ORDER_TRACKED| H5P_CRT_ORDER_INDEXED) < 0) ERR; if ((spaceid = H5Screate_simple(NDIMS, dims, dims)) < 0) ERR; if ((var2_id = H5Dcreate2(grpid, VAR2_NAME, H5T_NATIVE_FLOAT, spaceid, H5P_DEFAULT, create_propid, access_propid)) < 0) ERR; if (H5Pclose(create_propid) < 0) ERR; if (H5Pclose(access_propid) < 0) ERR; if (H5Sclose(spaceid) < 0) ERR; if (H5DSattach_scale(var2_id, dimscaleid, 0) < 0) ERR; /* Now detach the scales and remove the dimscale. This doesn't * work if I reverse the order of the statements. */ if (H5DSdetach_scale(var2_id, dimscaleid, 0) < 0) ERR; if (H5DSdetach_scale(var1_id, dimscaleid, 0) < 0) ERR; /* Fold up our tents. */ if (H5Dclose(var1_id) < 0) ERR; if (H5Dclose(dimscaleid) < 0) ERR; if (H5Gclose(grpid) < 0) ERR; if (H5Fclose(fileid) < 0) ERR; /* /\* Now read the file and check it. *\/ */ /* { */ /* hid_t fileid, spaceid = 0, datasetid = 0; */ /* hsize_t num_obj, i; */ /* int obj_class; */ /* char obj_name[STR_LEN + 1]; */ /* char dimscale_name[STR_LEN+1]; */ /* htri_t is_scale; */ /* char label[STR_LEN+1]; */ /* int num_scales; */ /* hsize_t dims[1], maxdims[1]; */ /* H5G_stat_t statbuf; */ /* HDF5_OBJID_T dimscale_obj, vars_dimscale_obj; */ /* struct nc_hdf5_link_info link_info; */ /* hsize_t idx = 0; */ /* /\* Open the file. *\/ */ /* if ((fileid = H5Fopen(FILE_NAME, H5F_ACC_RDWR, H5P_DEFAULT)) < 0) ERR; */ /* if ((grpid = H5Gopen2(fileid, "/", H5P_DEFAULT)) < 0) ERR; */ /* /\* Loop through objects in the root group. *\/ */ /* if (H5Gget_num_objs(fileid, &num_obj) < 0) ERR; */ /* for (i = 0; i < num_obj; i++) */ /* { */ /* if (H5Literate(grpid, H5_INDEX_CRT_ORDER, H5_ITER_INC, */ /* &idx, visit_link, (void *)&link_info) < 0) ERR; */ /* printf("Encountered: HDF5 object link_info.name %s\n", link_info.name); */ /* /\* Deal with object based on its obj_class. *\/ */ /* switch(link_info.obj_type) */ /* { */ /* case H5I_GROUP: */ /* break; */ /* case H5I_DATASET: */ /* /\* Open the dataset. *\/ */ /* if ((datasetid = H5Dopen1(fileid, link_info.name)) < 0) ERR; */ /* if ((spaceid = H5Dget_space(datasetid)) < 0) ERR; */ /* if (H5Sget_simple_extent_dims(spaceid, dims, maxdims) < 0) ERR; */ /* if (maxdims[0] != DIM_LEN) ERR; */ /* if (H5Sclose(spaceid) < 0) ERR; */ /* /\* Is this a dimscale? *\/ */ /* if ((is_scale = H5DSis_scale(datasetid)) < 0) ERR; */ /* if (is_scale && strcmp(link_info.name, DIMSCALE_NAME)) ERR; */ /* if (is_scale) */ /* { */ /* /\* A dimscale comes with a NAME attribute, in */ /* * addition to its real name. *\/ */ /* if (H5DSget_scale_name(datasetid, dimscale_name, STR_LEN) < 0) ERR; */ /* if (strcmp(dimscale_name, dimscale_wo_var)) ERR; */ /* /\* fileno and objno uniquely identify an object and a */ /* * HDF5 file. *\/ */ /* if (H5Gget_objinfo(datasetid, ".", 1, &statbuf) < 0) ERR; */ /* dimscale_obj.fileno[0] = statbuf.fileno[0]; */ /* dimscale_obj.objno[0] = statbuf.objno[0]; */ /* dimscale_obj.fileno[1] = statbuf.fileno[1]; */ /* dimscale_obj.objno[1] = statbuf.objno[1]; */ /* /\*printf("scale statbuf.fileno = %d statbuf.objno = %d\n", */ /* statbuf.fileno, statbuf.objno);*\/ */ /* } */ /* else */ /* { */ /* /\* Here's how to get the number of scales attached */ /* * to the dataset's dimension 0. *\/ */ /* if ((num_scales = H5DSget_num_scales(datasetid, 0)) < 0) ERR; */ /* if (num_scales != 1) ERR; */ /* /\* Go through all dimscales for this var and learn about them. *\/ */ /* if (H5DSiterate_scales(datasetid, 0, NULL, alien_visitor, */ /* &vars_dimscale_obj) < 0) ERR; */ /* /\*printf("vars_dimscale_obj.fileno = %d vars_dimscale_obj.objno = %d\n", */ /* vars_dimscale_obj.fileno, vars_dimscale_obj.objno);*\/ */ /* /\* if (vars_dimscale_obj.fileno[0] != dimscale_obj.fileno[0] || *\/ */ /* /\* vars_dimscale_obj.objno[0] != dimscale_obj.objno[0] || *\/ */ /* /\* vars_dimscale_obj.fileno[1] != dimscale_obj.fileno[1] || *\/ */ /* /\* vars_dimscale_obj.objno[1] != dimscale_obj.objno[1]) ERR; *\/ */ /* /\* There's also a label for dimension 0. *\/ */ /* if (H5DSget_label(datasetid, 0, label, STR_LEN) < 0) ERR; */ /* /\*printf("found non-scale dataset %s, label %s\n", link_info.name, label);*\/ */ /* } */ /* if (H5Dclose(datasetid) < 0) ERR; */ /* break; */ /* case H5I_DATATYPE: */ /* break; */ /* default: */ /* printf("Unknown object!"); */ /* ERR; */ /* } */ /* } */ /* /\* Close up the shop. *\/ */ /* if (H5Fclose(fileid) < 0) ERR; */ /* }*/ } SUMMARIZE_ERR; FINAL_RESULTS; }