This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by netCDF configure 4.2, which was generated by GNU Autoconf 2.69. Invocation command line was $ ./configure --prefix=/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/netcdf/4.2 --enable-cdf5 --disable-dap --enable-netcdf-4 --disable-doxygen --disable-shared ## --------- ## ## Platform. ## ## --------- ## hostname = dlogin08 uname -m = x86_64 uname -r = 5.3.18-150300.59.106-default uname -s = Linux uname -v = #1 SMP Mon Dec 12 13:16:24 UTC 2022 (774239c) /usr/bin/uname -p = x86_64 /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /apps/spack/curl/7.72.0/intel/19.1.3.304/yjtxk7r7mujxmhu4penm6bhtsva6ednv/bin PATH: /apps/spack/libpng/1.6.37/intel/19.1.3.304/4ohkronuhlyherusoszzrmur5ewvlwzh/bin PATH: /apps/spack/jasper/2.0.25/intel/19.1.3.304/sjib74krrorkyczqpqah4tvewmlnqdx4/bin PATH: /opt/cray/pe/mpich/8.1.7/ofi/intel/19.0/bin PATH: /opt/cray/pe/craype/2.7.10/bin PATH: /pe/intel/compilers_and_libraries_2020.4.304/linux/bin/intel64 PATH: /pe/intel/compilers_and_libraries_2020.4.304/linux/bin PATH: /pe/intel/compilers_and_libraries_2020.4.304/linux/mpi/intel64/bin PATH: /pe/intel/debugger_2020/gdb/intel64/bin PATH: /opt/cray/libfabric/1.11.0.0./bin PATH: /opt/clmgr/sbin PATH: /opt/clmgr/bin PATH: /opt/sgi/sbin PATH: /opt/sgi/bin PATH: /u/ops.para/bin PATH: /usr/local/bin PATH: /usr/bin PATH: /bin PATH: /usr/lib/mit/bin PATH: /usr/lib/mit/sbin PATH: /opt/pbs/bin PATH: /sbin PATH: /u/gregory.mott/on_call_tools PATH: /opt/cray/pe/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:2757: netCDF 4.2 configure:2797: checking build system type configure:2811: result: x86_64-pc-linux-gnu configure:2831: checking host system type configure:2844: result: x86_64-pc-linux-gnu configure:2866: checking target system type configure:2879: result: x86_64-pc-linux-gnu configure:2926: checking for a BSD-compatible install configure:2994: result: /usr/bin/install -c configure:3005: checking whether build environment is sane configure:3060: result: yes configure:3211: checking for a thread-safe mkdir -p configure:3250: result: /u/ops.para/bin/mkdir -p configure:3257: checking for gawk configure:3273: found /u/ops.para/bin/gawk configure:3284: result: gawk configure:3295: checking whether make sets $(MAKE) configure:3317: result: yes configure:3346: checking whether make supports nested variables configure:3363: result: yes configure:3493: checking user options configure:3497: checking whether a NCIO_MINBLOCKSIZE was specified configure:3507: result: 256 configure:3538: checking if fsync support is enabled configure:3546: result: yes configure:3555: checking whether extra valgrind tests should be run configure:3563: result: no configure:3567: checking whether we should try to build netCDF-4 configure:3575: result: yes configure:3590: checking whether reading of HDF4 SD files is to be enabled configure:3598: result: no configure:3602: checking whether to fetch some sample HDF4 files from Unidata ftp site to test HDF4 reading (requires wget) configure:3615: result: no configure:3619: checking whether parallel I/O for classic and 64-bit offset files using parallel-netcdf is to be enabled configure:3627: result: no configure:3631: checking whether extra example tests should be run configure:3639: result: no configure:3643: checking whether parallel IO tests should be run configure:3651: result: no configure:3655: checking whether a default chunk size in bytes was specified configure:3665: result: 4194304 configure:3674: checking whether a maximum per-variable cache size for HDF5 was specified configure:3684: result: 67108864 configure:3693: checking whether a number of chunks for the default per-variable cache was specified configure:3703: result: 10 configure:3712: checking whether a default file cache size for HDF5 was specified configure:3722: result: 4194304 configure:3731: checking whether a default file cache maximum number of elements for HDF5 was specified configure:3741: result: 1009 configure:3750: checking whether a default cache preemption for HDF5 was specified configure:3760: result: 0.75 configure:3769: checking whether netCDF-4 logging is enabled configure:3777: result: no configure:3781: checking whether cdmremote client is to be built configure:3791: result: no configure:3795: checking whether DAP client is to be built configure:3803: result: no configure:3840: checking for style of include used by make configure:3868: result: GNU configure:3939: checking for gcc configure:3966: result: cc configure:4195: checking for C compiler version configure:4204: cc --version >&5 icc (ICC) 19.1.3.304 20200925 Copyright (C) 1985-2020 Intel Corporation. All rights reserved. configure:4215: $? = 0 configure:4204: cc -v >&5 icc version 19.1.3.304 (gcc version 7.5.0 compatibility) configure:4215: $? = 0 configure:4204: cc -V >&5 Intel(R) C Intel(R) 64 Compiler for applications running on Intel(R) 64, Version 19.1.3.304 Build 20200925_000000 Copyright (C) 1985-2020 Intel Corporation. All rights reserved. configure:4215: $? = 0 configure:4204: cc -qversion >&5 icc: command line warning #10006: ignoring unknown option '-qversion' icc: command line error: no files specified; for help type "icc -help" configure:4215: $? = 1 configure:4235: checking whether the C compiler works configure:4257: cc -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:4261: $? = 0 configure:4309: result: yes configure:4312: checking for C compiler default output file name configure:4314: result: a.out configure:4320: checking for suffix of executables configure:4327: cc -o conftest -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:4331: $? = 0 configure:4353: result: configure:4375: checking whether we are cross compiling configure:4383: cc -o conftest -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:4387: $? = 0 configure:4394: ./conftest configure:4398: $? = 0 configure:4413: result: no configure:4418: checking for suffix of object files configure:4440: cc -c -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:4444: $? = 0 configure:4465: result: o configure:4469: checking whether we are using the GNU C compiler configure:4488: cc -c -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:4488: $? = 0 configure:4497: result: yes configure:4506: checking whether cc accepts -g configure:4526: cc -c -g -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:4526: $? = 0 configure:4567: result: yes configure:4584: checking for cc option to accept ISO C89 configure:4647: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:4647: $? = 0 configure:4660: result: none needed configure:4685: checking whether cc understands -c and -o together configure:4707: cc -c conftest.c -o conftest2.o configure:4710: $? = 0 configure:4707: cc -c conftest.c -o conftest2.o configure:4710: $? = 0 configure:4722: result: yes configure:4741: checking dependency style of cc configure:4852: result: gcc3 configure:4868: checking for curl_easy_setopt in -lcurl configure:4893: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lcurl -lhdf5_hl -lhdf5 -lz >&5 configure:4893: $? = 0 configure:4902: result: yes configure:4971: checking whether dap remote testing should be enabled (default on) configure:4982: result: no configure:4986: checking whether netcdf4 group names should be enabled (default on) configure:4995: dap groups disabled because dap disabled or netcdf-4 disabled configure:4999: result: no configure:5035: checking whether the time-consuming dap tests should be enabled (default off) configure:5046: result: no configure:5059: checking whether netCDF extra tests should be run (developers only) configure:5067: result: no configure:5084: checking whether FFIO will be used configure:5092: result: no configure:5129: checking whether examples should be built configure:5137: result: yes configure:5149: checking whether v2 netCDF API should be built configure:5157: result: yes configure:5176: checking whether the ncgen/ncdump/nccopy should be built configure:5185: result: yes configure:5197: checking whether large file (> 2GB) tests should be run configure:5205: result: no configure:5222: checking whether benchmaks should be run (experimental) configure:5230: result: no configure:5242: checking whether extreme numbers should be used in tests configure:5257: result: yes configure:5269: checking where to put large temp files if large file tests are run configure:5278: result: . configure:5289: checking whether a win32 DLL is desired configure:5297: result: no configure:5319: finding C compiler configure:5370: checking for gcc configure:5397: result: cc configure:5626: checking for C compiler version configure:5635: cc --version >&5 icc (ICC) 19.1.3.304 20200925 Copyright (C) 1985-2020 Intel Corporation. All rights reserved. configure:5646: $? = 0 configure:5635: cc -v >&5 icc version 19.1.3.304 (gcc version 7.5.0 compatibility) configure:5646: $? = 0 configure:5635: cc -V >&5 Intel(R) C Intel(R) 64 Compiler for applications running on Intel(R) 64, Version 19.1.3.304 Build 20200925_000000 Copyright (C) 1985-2020 Intel Corporation. All rights reserved. configure:5646: $? = 0 configure:5635: cc -qversion >&5 icc: command line warning #10006: ignoring unknown option '-qversion' icc: command line error: no files specified; for help type "icc -help" configure:5646: $? = 1 configure:5650: checking whether we are using the GNU C compiler configure:5678: result: yes configure:5687: checking whether cc accepts -g configure:5748: result: yes configure:5765: checking for cc option to accept ISO C89 configure:5841: result: none needed configure:5866: checking whether cc understands -c and -o together configure:5903: result: yes configure:5922: checking dependency style of cc configure:6033: result: gcc3 configure:6049: checking for an ANSI C-conforming const configure:6115: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:6115: $? = 0 configure:6122: result: yes configure:6147: cc -c -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:6147: $? = 0 configure:6153: checking whether a CURLOPT_KEYPASSWD is defined configure:6155: result: yes configure:6165: setting up libtool configure:6214: checking how to print strings configure:6241: result: printf configure:6262: checking for a sed that does not truncate output configure:6326: result: /u/ops.para/bin/sed configure:6344: checking for grep that handles long lines and -e configure:6402: result: /u/ops.para/bin/grep configure:6407: checking for egrep configure:6469: result: /u/ops.para/bin/grep -E configure:6474: checking for fgrep configure:6536: result: /u/ops.para/bin/grep -F configure:6571: checking for ld used by cc configure:6638: result: /usr/x86_64-suse-linux/bin/ld configure:6645: checking if the linker (/usr/x86_64-suse-linux/bin/ld) is GNU ld configure:6660: result: yes configure:6672: checking for BSD- or MS-compatible name lister (nm) configure:6726: result: /usr/bin/nm -B configure:6856: checking the name lister (/usr/bin/nm -B) interface configure:6863: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:6866: /usr/bin/nm -B "conftest.o" configure:6869: output 0000000000000000 N .debug_info_seg 0000000000000000 B some_variable configure:6876: result: BSD nm configure:6879: checking whether ln -s works configure:6883: result: yes configure:6891: checking the maximum length of command line arguments configure:7022: result: 3458764513820540925 configure:7070: checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format configure:7110: result: func_convert_file_noop configure:7117: checking how to convert x86_64-pc-linux-gnu file names to toolchain format configure:7137: result: func_convert_file_noop configure:7144: checking for /usr/x86_64-suse-linux/bin/ld option to reload object files configure:7151: result: -r configure:7225: checking for objdump configure:7241: found /usr/bin/objdump configure:7252: result: objdump configure:7281: checking how to recognize dependent libraries configure:7481: result: pass_all configure:7566: checking for dlltool configure:7596: result: no configure:7623: checking how to associate runtime and link libraries configure:7650: result: printf %s\n configure:7710: checking for ar configure:7726: found /usr/bin/ar configure:7737: result: ar configure:7774: checking for archiver @FILE support configure:7791: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:7791: $? = 0 configure:7794: ar cru libconftest.a @conftest.lst >&5 configure:7797: $? = 0 configure:7802: ar cru libconftest.a @conftest.lst >&5 ar: conftest.o: No such file or directory configure:7805: $? = 1 configure:7817: result: @ configure:7875: checking for strip configure:7891: found /usr/bin/strip configure:7902: result: strip configure:7974: checking for ranlib configure:7990: found /usr/bin/ranlib configure:8001: result: ranlib configure:8103: checking command to parse /usr/bin/nm -B output from cc object configure:8256: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:8259: $? = 0 configure:8263: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:8266: $? = 0 configure:8332: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c conftstm.o >&5 configure:8335: $? = 0 configure:8373: result: ok configure:8420: checking for sysroot configure:8450: result: no configure:8457: checking for a working dd configure:8495: result: /u/ops.para/bin/dd configure:8499: checking how to truncate binary pipes configure:8514: result: /u/ops.para/bin/dd bs=4096 count=1 configure:8650: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:8653: $? = 0 configure:8843: checking for mt configure:8859: found /usr/bin/mt configure:8870: result: mt configure:8893: checking if mt is a manifest tool configure:8899: mt '-?' configure:8907: result: no configure:9584: checking how to run the C preprocessor configure:9615: cc -E -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c configure:9615: $? = 0 configure:9629: cc -E -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c conftest.c(22): error #2379: cannot open source file "ac_nonexistent.h" #include ^ configure:9629: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.2" | #define PACKAGE_STRING "netCDF 4.2" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf" | #define VERSION "4.2" | #define NCIO_MINBLOCKSIZE 256 | #define USE_FSYNC 1 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define HAVE_CURLOPT_KEYPASSWD 1 | /* end confdefs.h. */ | #include configure:9654: result: cc -E configure:9674: cc -E -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c configure:9674: $? = 0 configure:9688: cc -E -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c conftest.c(22): error #2379: cannot open source file "ac_nonexistent.h" #include ^ configure:9688: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.2" | #define PACKAGE_STRING "netCDF 4.2" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf" | #define VERSION "4.2" | #define NCIO_MINBLOCKSIZE 256 | #define USE_FSYNC 1 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define HAVE_CURLOPT_KEYPASSWD 1 | /* end confdefs.h. */ | #include configure:9717: checking for ANSI C header files configure:9737: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:9737: $? = 0 configure:9810: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:9810: $? = 0 configure:9810: ./conftest configure:9810: $? = 0 configure:9821: result: yes configure:9834: checking for sys/types.h configure:9834: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:9834: $? = 0 configure:9834: result: yes configure:9834: checking for sys/stat.h configure:9834: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:9834: $? = 0 configure:9834: result: yes configure:9834: checking for stdlib.h configure:9834: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:9834: $? = 0 configure:9834: result: yes configure:9834: checking for string.h configure:9834: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:9834: $? = 0 configure:9834: result: yes configure:9834: checking for memory.h configure:9834: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:9834: $? = 0 configure:9834: result: yes configure:9834: checking for strings.h configure:9834: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:9834: $? = 0 configure:9834: result: yes configure:9834: checking for inttypes.h configure:9834: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:9834: $? = 0 configure:9834: result: yes configure:9834: checking for stdint.h configure:9834: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:9834: $? = 0 configure:9834: result: yes configure:9834: checking for unistd.h configure:9834: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:9834: $? = 0 configure:9834: result: yes configure:9848: checking for dlfcn.h configure:9848: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:9848: $? = 0 configure:9848: result: yes configure:10402: checking for objdir configure:10417: result: .libs configure:10681: checking if cc supports -fno-rtti -fno-exceptions configure:10699: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -fno-rtti -fno-exceptions conftest.c >&5 configure:10703: $? = 0 configure:10716: result: yes configure:11074: checking for cc option to produce PIC configure:11081: result: -fPIC -DPIC configure:11089: checking if cc PIC flag -fPIC -DPIC works configure:11107: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -fPIC -DPIC -DPIC conftest.c >&5 configure:11111: $? = 0 configure:11124: result: yes configure:11153: checking if cc static flag -static works configure:11181: result: no configure:11196: checking if cc supports -c -o file.o configure:11217: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -o out/conftest2.o conftest.c >&5 configure:11221: $? = 0 configure:11243: result: yes configure:11251: checking if cc supports -c -o file.o configure:11298: result: yes configure:11331: checking whether the cc linker (/usr/x86_64-suse-linux/bin/ld -m elf_x86_64) supports shared libraries configure:12590: result: yes configure:12830: checking dynamic linker characteristics configure:13411: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib -Wl,-rpath -Wl,/foo conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:13411: $? = 0 configure:13648: result: GNU/Linux ld.so configure:13770: checking how to hardcode library paths into programs configure:13795: result: immediate configure:14343: checking whether stripping libraries is possible configure:14348: result: yes configure:14383: checking if libtool supports shared libraries configure:14385: result: yes configure:14388: checking whether to build shared libraries configure:14413: result: no configure:14416: checking whether to build static libraries configure:14420: result: yes configure:14466: finding other utilities configure:14474: checking for doxygen configure:14490: found /usr/bin/doxygen configure:14501: result: doxygen configure:14540: checking for special C compiler options needed for large files configure:14585: result: no configure:14591: checking for _FILE_OFFSET_BITS value needed for large files configure:14616: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:14616: $? = 0 configure:14648: result: no configure:14734: displaying some results configure:14740: checking CPPFLAGS configure:14742: result: -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include configure:14744: checking CC CFLAGS configure:14746: result: cc -g -O2 configure:14749: checking type cc configure:14751: result: cc is /opt/cray/pe/craype/2.7.10/bin/cc configure:14754: checking CXX configure:14757: result: CC configure:14759: checking CXXFLAGS configure:14761: result: configure:14764: checking type CC configure:14766: result: CC is /opt/cray/pe/craype/2.7.10/bin/CC configure:14773: checking FC configure:14776: result: ftn configure:14778: checking FFLAGS configure:14780: result: configure:14783: checking type ftn configure:14785: result: ftn is /opt/cray/pe/craype/2.7.10/bin/ftn configure:14792: checking F90 configure:14807: result: unset configure:14811: checking AR configure:14814: result: ar configure:14816: checking AR_FLAGS configure:14818: result: cru configure:14821: checking type ar configure:14823: result: ar is /usr/bin/ar configure:14830: checking NM configure:14833: result: /usr/bin/nm -B configure:14835: checking NMFLAGS configure:14837: result: configure:14852: checking types, headers, and functions configure:14855: checking for stdlib.h configure:14855: result: yes configure:14865: checking for sys/types.h configure:14865: result: yes configure:14877: checking sys/param.h usability configure:14877: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:14877: $? = 0 configure:14877: result: yes configure:14877: checking sys/param.h presence configure:14877: cc -E -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c configure:14877: $? = 0 configure:14877: result: yes configure:14877: checking for sys/param.h configure:14877: result: yes configure:14891: checking for dirent.h that defines DIR configure:14910: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:14910: $? = 0 configure:14918: result: yes configure:14931: checking for library containing opendir configure:14962: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:14962: $? = 0 configure:14979: result: none required configure:15046: checking for ANSI C header files configure:15150: result: yes configure:15158: checking for sys/wait.h that is POSIX.1 compatible configure:15184: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15184: $? = 0 configure:15191: result: yes configure:15199: checking whether time.h and sys/time.h may both be included configure:15219: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15219: $? = 0 configure:15226: result: yes configure:15238: checking locale.h usability configure:15238: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15238: $? = 0 configure:15238: result: yes configure:15238: checking locale.h presence configure:15238: cc -E -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c configure:15238: $? = 0 configure:15238: result: yes configure:15238: checking for locale.h configure:15238: result: yes configure:15238: checking stdio.h usability configure:15238: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15238: $? = 0 configure:15238: result: yes configure:15238: checking stdio.h presence configure:15238: cc -E -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c configure:15238: $? = 0 configure:15238: result: yes configure:15238: checking for stdio.h configure:15238: result: yes configure:15238: checking stdarg.h usability configure:15238: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15238: $? = 0 configure:15238: result: yes configure:15238: checking stdarg.h presence configure:15238: cc -E -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c configure:15238: $? = 0 configure:15238: result: yes configure:15238: checking for stdarg.h configure:15238: result: yes configure:15238: checking errno.h usability configure:15238: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15238: $? = 0 configure:15238: result: yes configure:15238: checking errno.h presence configure:15238: cc -E -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c configure:15238: $? = 0 configure:15238: result: yes configure:15238: checking for errno.h configure:15238: result: yes configure:15238: checking ctype.h usability configure:15238: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15238: $? = 0 configure:15238: result: yes configure:15238: checking ctype.h presence configure:15238: cc -E -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c configure:15238: $? = 0 configure:15238: result: yes configure:15238: checking for ctype.h configure:15238: result: yes configure:15238: checking fcntl.h usability configure:15238: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15238: $? = 0 configure:15238: result: yes configure:15238: checking fcntl.h presence configure:15238: cc -E -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c configure:15238: $? = 0 configure:15238: result: yes configure:15238: checking for fcntl.h configure:15238: result: yes configure:15238: checking malloc.h usability configure:15238: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15238: $? = 0 configure:15238: result: yes configure:15238: checking malloc.h presence configure:15238: cc -E -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c configure:15238: $? = 0 configure:15238: result: yes configure:15238: checking for malloc.h configure:15238: result: yes configure:15238: checking for stdlib.h configure:15238: result: yes configure:15238: checking for string.h configure:15238: result: yes configure:15238: checking for strings.h configure:15238: result: yes configure:15238: checking for unistd.h configure:15238: result: yes configure:15238: checking for sys/stat.h configure:15238: result: yes configure:15238: checking getopt.h usability configure:15238: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15238: $? = 0 configure:15238: result: yes configure:15238: checking getopt.h presence configure:15238: cc -E -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c configure:15238: $? = 0 configure:15238: result: yes configure:15238: checking for getopt.h configure:15238: result: yes configure:15238: checking sys/time.h usability configure:15238: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15238: $? = 0 configure:15238: result: yes configure:15238: checking sys/time.h presence configure:15238: cc -E -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c configure:15238: $? = 0 configure:15238: result: yes configure:15238: checking for sys/time.h configure:15238: result: yes configure:15238: checking sys/resource.h usability configure:15238: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15238: $? = 0 configure:15238: result: yes configure:15238: checking sys/resource.h presence configure:15238: cc -E -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c configure:15238: $? = 0 configure:15238: result: yes configure:15238: checking for sys/resource.h configure:15238: result: yes configure:15250: checking for vprintf configure:15250: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15250: $? = 0 configure:15250: result: yes configure:15256: checking for _doprnt configure:15256: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 /usr/lib64/gcc/x86_64-suse-linux/7/../../../../x86_64-suse-linux/bin/ld: /tmp/iccfYz2Op.o: in function `main': /lfs/h1/ops/para/packages/nwps.v1.4.10/lib/sorc/netcdf-4.2/conftest.c:89: undefined reference to `_doprnt' configure:15256: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.2" | #define PACKAGE_STRING "netCDF 4.2" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf" | #define VERSION "4.2" | #define NCIO_MINBLOCKSIZE 256 | #define USE_FSYNC 1 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define HAVE_CURLOPT_KEYPASSWD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_DIRENT_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_VPRINTF 1 | /* end confdefs.h. */ | /* Define _doprnt to an innocuous variant, in case declares _doprnt. | For example, HP-UX 11i declares gettimeofday. */ | #define _doprnt innocuous__doprnt | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char _doprnt (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef _doprnt | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char _doprnt (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub__doprnt || defined __stub____doprnt | choke me | #endif | | int | main () | { | return _doprnt (); | ; | return 0; | } configure:15256: result: no configure:15269: checking for stdbool.h that conforms to C99 configure:15336: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15336: $? = 0 configure:15343: result: yes configure:15345: checking for _Bool configure:15345: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15345: $? = 0 configure:15345: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 conftest.c(91): error: expected an expression if (sizeof ((_Bool))) ^ compilation aborted for conftest.c (code 2) configure:15345: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.2" | #define PACKAGE_STRING "netCDF 4.2" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf" | #define VERSION "4.2" | #define NCIO_MINBLOCKSIZE 256 | #define USE_FSYNC 1 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define HAVE_CURLOPT_KEYPASSWD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_DIRENT_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_VPRINTF 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((_Bool))) | return 0; | ; | return 0; | } configure:15345: result: yes configure:15370: checking for strlcat configure:15370: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 /usr/lib64/gcc/x86_64-suse-linux/7/../../../../x86_64-suse-linux/bin/ld: /tmp/iccqIxULS.o: in function `main': /lfs/h1/ops/para/packages/nwps.v1.4.10/lib/sorc/netcdf-4.2/conftest.c:91: undefined reference to `strlcat' configure:15370: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.2" | #define PACKAGE_STRING "netCDF 4.2" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf" | #define VERSION "4.2" | #define NCIO_MINBLOCKSIZE 256 | #define USE_FSYNC 1 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define HAVE_CURLOPT_KEYPASSWD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_DIRENT_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_VPRINTF 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | /* end confdefs.h. */ | /* Define strlcat to an innocuous variant, in case declares strlcat. | For example, HP-UX 11i declares gettimeofday. */ | #define strlcat innocuous_strlcat | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char strlcat (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef strlcat | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char strlcat (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_strlcat || defined __stub___strlcat | choke me | #endif | | int | main () | { | return strlcat (); | ; | return 0; | } configure:15370: result: no configure:15370: checking for strerror configure:15370: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15370: $? = 0 configure:15370: result: yes configure:15370: checking for snprintf configure:15370: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15370: $? = 0 configure:15370: result: yes configure:15370: checking for strchr configure:15370: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15370: $? = 0 configure:15370: result: yes configure:15370: checking for strrchr configure:15370: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15370: $? = 0 configure:15370: result: yes configure:15370: checking for strcat configure:15370: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15370: $? = 0 configure:15370: result: yes configure:15370: checking for strcpy configure:15370: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15370: $? = 0 configure:15370: result: yes configure:15370: checking for strdup configure:15370: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15370: $? = 0 configure:15370: result: yes configure:15370: checking for strcasecmp configure:15370: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15370: $? = 0 configure:15370: result: yes configure:15370: checking for strtod configure:15370: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15370: $? = 0 configure:15370: result: yes configure:15370: checking for strtoll configure:15370: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15370: $? = 0 configure:15370: result: yes configure:15370: checking for strtoull configure:15370: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15370: $? = 0 configure:15370: result: yes configure:15370: checking for strstr configure:15370: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15370: $? = 0 configure:15370: result: yes configure:15370: checking for mkstemp configure:15370: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15370: $? = 0 configure:15370: result: yes configure:15370: checking for getpid configure:15370: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15370: $? = 0 configure:15370: result: yes configure:15370: checking for getrlimit configure:15370: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15370: $? = 0 configure:15370: result: yes configure:15370: checking for gettimeofday configure:15370: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15370: $? = 0 configure:15370: result: yes configure:15370: checking for fsync configure:15370: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15370: $? = 0 configure:15370: result: yes configure:15370: checking for MPI_Comm_f2c configure:15370: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 /usr/lib64/gcc/x86_64-suse-linux/7/../../../../x86_64-suse-linux/bin/ld: /tmp/iccwKUfZV.o: in function `main': /lfs/h1/ops/para/packages/nwps.v1.4.10/lib/sorc/netcdf-4.2/conftest.c:108: undefined reference to `MPI_Comm_f2c' configure:15370: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.2" | #define PACKAGE_STRING "netCDF 4.2" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf" | #define VERSION "4.2" | #define NCIO_MINBLOCKSIZE 256 | #define USE_FSYNC 1 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define HAVE_CURLOPT_KEYPASSWD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_DIRENT_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_VPRINTF 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRCHR 1 | #define HAVE_STRRCHR 1 | #define HAVE_STRCAT 1 | #define HAVE_STRCPY 1 | #define HAVE_STRDUP 1 | #define HAVE_STRCASECMP 1 | #define HAVE_STRTOD 1 | #define HAVE_STRTOLL 1 | #define HAVE_STRTOULL 1 | #define HAVE_STRSTR 1 | #define HAVE_MKSTEMP 1 | #define HAVE_GETPID 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_FSYNC 1 | /* end confdefs.h. */ | /* Define MPI_Comm_f2c to an innocuous variant, in case declares MPI_Comm_f2c. | For example, HP-UX 11i declares gettimeofday. */ | #define MPI_Comm_f2c innocuous_MPI_Comm_f2c | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char MPI_Comm_f2c (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef MPI_Comm_f2c | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char MPI_Comm_f2c (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_MPI_Comm_f2c || defined __stub___MPI_Comm_f2c | choke me | #endif | | int | main () | { | return MPI_Comm_f2c (); | ; | return 0; | } configure:15370: result: no configure:15379: checking for size_t configure:15379: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15379: $? = 0 configure:15379: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 conftest.c(110): error: expected an expression if (sizeof ((size_t))) ^ compilation aborted for conftest.c (code 2) configure:15379: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.2" | #define PACKAGE_STRING "netCDF 4.2" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf" | #define VERSION "4.2" | #define NCIO_MINBLOCKSIZE 256 | #define USE_FSYNC 1 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define HAVE_CURLOPT_KEYPASSWD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_DIRENT_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_VPRINTF 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRCHR 1 | #define HAVE_STRRCHR 1 | #define HAVE_STRCAT 1 | #define HAVE_STRCPY 1 | #define HAVE_STRDUP 1 | #define HAVE_STRCASECMP 1 | #define HAVE_STRTOD 1 | #define HAVE_STRTOLL 1 | #define HAVE_STRTOULL 1 | #define HAVE_STRSTR 1 | #define HAVE_MKSTEMP 1 | #define HAVE_GETPID 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_FSYNC 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((size_t))) | return 0; | ; | return 0; | } configure:15379: result: yes configure:15392: checking for working alloca.h configure:15409: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15409: $? = 0 configure:15417: result: yes configure:15425: checking for alloca configure:15462: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15462: $? = 0 configure:15470: result: yes configure:15576: checking whether isnan is declared configure:15576: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15576: $? = 0 configure:15576: result: yes configure:15587: checking whether isinf is declared configure:15587: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15587: $? = 0 configure:15587: result: yes configure:15598: checking whether isfinite is declared configure:15598: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15598: $? = 0 configure:15598: result: yes configure:15609: checking whether signbit is declared configure:15609: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15609: $? = 0 configure:15609: result: yes configure:15621: checking for struct stat.st_blksize configure:15621: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15621: $? = 0 configure:15621: result: yes configure:15635: checking for IEEE floating point format configure:15673: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:15673: $? = 0 configure:15673: ./conftest configure:15673: $? = 0 configure:15682: result: yes configure:15690: checking for size_t configure:15690: result: yes configure:15701: checking for off_t configure:15701: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15701: $? = 0 configure:15701: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 conftest.c(118): error: expected an expression if (sizeof ((off_t))) ^ compilation aborted for conftest.c (code 2) configure:15701: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.2" | #define PACKAGE_STRING "netCDF 4.2" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf" | #define VERSION "4.2" | #define NCIO_MINBLOCKSIZE 256 | #define USE_FSYNC 1 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define HAVE_CURLOPT_KEYPASSWD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_DIRENT_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_VPRINTF 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRCHR 1 | #define HAVE_STRRCHR 1 | #define HAVE_STRCAT 1 | #define HAVE_STRCPY 1 | #define HAVE_STRDUP 1 | #define HAVE_STRCASECMP 1 | #define HAVE_STRTOD 1 | #define HAVE_STRTOLL 1 | #define HAVE_STRTOULL 1 | #define HAVE_STRSTR 1 | #define HAVE_MKSTEMP 1 | #define HAVE_GETPID 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_FSYNC 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_SIGNBIT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((off_t))) | return 0; | ; | return 0; | } configure:15701: result: yes configure:15712: checking for ssize_t configure:15712: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15712: $? = 0 configure:15712: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 conftest.c(118): error: expected an expression if (sizeof ((ssize_t))) ^ compilation aborted for conftest.c (code 2) configure:15712: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.2" | #define PACKAGE_STRING "netCDF 4.2" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf" | #define VERSION "4.2" | #define NCIO_MINBLOCKSIZE 256 | #define USE_FSYNC 1 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define HAVE_CURLOPT_KEYPASSWD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_DIRENT_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_VPRINTF 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRCHR 1 | #define HAVE_STRRCHR 1 | #define HAVE_STRCAT 1 | #define HAVE_STRCPY 1 | #define HAVE_STRDUP 1 | #define HAVE_STRCASECMP 1 | #define HAVE_STRTOD 1 | #define HAVE_STRTOLL 1 | #define HAVE_STRTOULL 1 | #define HAVE_STRSTR 1 | #define HAVE_MKSTEMP 1 | #define HAVE_GETPID 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_FSYNC 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_SIGNBIT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((ssize_t))) | return 0; | ; | return 0; | } configure:15712: result: yes configure:15721: checking for ptrdiff_t configure:15721: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15721: $? = 0 configure:15721: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 conftest.c(119): error: expected an expression if (sizeof ((ptrdiff_t))) ^ compilation aborted for conftest.c (code 2) configure:15721: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.2" | #define PACKAGE_STRING "netCDF 4.2" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf" | #define VERSION "4.2" | #define NCIO_MINBLOCKSIZE 256 | #define USE_FSYNC 1 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define HAVE_CURLOPT_KEYPASSWD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_DIRENT_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_VPRINTF 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRCHR 1 | #define HAVE_STRRCHR 1 | #define HAVE_STRCAT 1 | #define HAVE_STRCPY 1 | #define HAVE_STRDUP 1 | #define HAVE_STRCASECMP 1 | #define HAVE_STRTOD 1 | #define HAVE_STRTOLL 1 | #define HAVE_STRTOULL 1 | #define HAVE_STRSTR 1 | #define HAVE_MKSTEMP 1 | #define HAVE_GETPID 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_FSYNC 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_SIGNBIT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | #define HAVE_SSIZE_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((ptrdiff_t))) | return 0; | ; | return 0; | } configure:15721: result: yes configure:15730: checking for uchar configure:15730: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 conftest.c(120): error: identifier "uchar" is undefined if (sizeof (uchar)) ^ compilation aborted for conftest.c (code 2) configure:15730: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.2" | #define PACKAGE_STRING "netCDF 4.2" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf" | #define VERSION "4.2" | #define NCIO_MINBLOCKSIZE 256 | #define USE_FSYNC 1 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define HAVE_CURLOPT_KEYPASSWD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_DIRENT_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_VPRINTF 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRCHR 1 | #define HAVE_STRRCHR 1 | #define HAVE_STRCAT 1 | #define HAVE_STRCPY 1 | #define HAVE_STRDUP 1 | #define HAVE_STRCASECMP 1 | #define HAVE_STRTOD 1 | #define HAVE_STRTOLL 1 | #define HAVE_STRTOULL 1 | #define HAVE_STRSTR 1 | #define HAVE_MKSTEMP 1 | #define HAVE_GETPID 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_FSYNC 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_SIGNBIT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof (uchar)) | return 0; | ; | return 0; | } configure:15730: result: no configure:15739: checking for longlong configure:15739: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 conftest.c(120): error: identifier "longlong" is undefined if (sizeof (longlong)) ^ compilation aborted for conftest.c (code 2) configure:15739: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.2" | #define PACKAGE_STRING "netCDF 4.2" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf" | #define VERSION "4.2" | #define NCIO_MINBLOCKSIZE 256 | #define USE_FSYNC 1 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define HAVE_CURLOPT_KEYPASSWD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_DIRENT_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_VPRINTF 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRCHR 1 | #define HAVE_STRRCHR 1 | #define HAVE_STRCAT 1 | #define HAVE_STRCPY 1 | #define HAVE_STRDUP 1 | #define HAVE_STRCASECMP 1 | #define HAVE_STRTOD 1 | #define HAVE_STRTOLL 1 | #define HAVE_STRTOULL 1 | #define HAVE_STRSTR 1 | #define HAVE_MKSTEMP 1 | #define HAVE_GETPID 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_FSYNC 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_SIGNBIT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof (longlong)) | return 0; | ; | return 0; | } configure:15739: result: no configure:15749: checking whether char is unsigned configure:15768: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15768: $? = 0 configure:15775: result: no configure:15782: checking whether byte ordering is bigendian configure:15797: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 conftest.c(85): error: identifier "not" is undefined not a universal capable compiler ^ conftest.c(85): error: expected a ";" not a universal capable compiler ^ compilation aborted for conftest.c (code 2) configure:15797: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.2" | #define PACKAGE_STRING "netCDF 4.2" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf" | #define VERSION "4.2" | #define NCIO_MINBLOCKSIZE 256 | #define USE_FSYNC 1 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define HAVE_CURLOPT_KEYPASSWD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_DIRENT_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_VPRINTF 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRCHR 1 | #define HAVE_STRRCHR 1 | #define HAVE_STRCAT 1 | #define HAVE_STRCPY 1 | #define HAVE_STRDUP 1 | #define HAVE_STRCASECMP 1 | #define HAVE_STRTOD 1 | #define HAVE_STRTOLL 1 | #define HAVE_STRTOULL 1 | #define HAVE_STRSTR 1 | #define HAVE_MKSTEMP 1 | #define HAVE_GETPID 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_FSYNC 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_SIGNBIT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | /* end confdefs.h. */ | #ifndef __APPLE_CC__ | not a universal capable compiler | #endif | typedef int dummy; | configure:15842: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:15842: $? = 0 configure:15860: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 conftest.c(91): error: identifier "not" is undefined not big endian ^ conftest.c(91): error: expected a ";" not big endian ^ conftest.c(94): warning #12: parsing restarts here after previous syntax error ; ^ compilation aborted for conftest.c (code 2) configure:15860: $? = 2 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.2" | #define PACKAGE_STRING "netCDF 4.2" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf" | #define VERSION "4.2" | #define NCIO_MINBLOCKSIZE 256 | #define USE_FSYNC 1 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define HAVE_CURLOPT_KEYPASSWD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_DIRENT_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_VPRINTF 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRCHR 1 | #define HAVE_STRRCHR 1 | #define HAVE_STRCAT 1 | #define HAVE_STRCPY 1 | #define HAVE_STRDUP 1 | #define HAVE_STRCASECMP 1 | #define HAVE_STRTOD 1 | #define HAVE_STRTOLL 1 | #define HAVE_STRTOULL 1 | #define HAVE_STRSTR 1 | #define HAVE_MKSTEMP 1 | #define HAVE_GETPID 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_FSYNC 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_SIGNBIT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | /* end confdefs.h. */ | #include | #include | | int | main () | { | #if BYTE_ORDER != BIG_ENDIAN | not big endian | #endif | | ; | return 0; | } configure:15988: result: no configure:16010: checking size of short configure:16015: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:16015: $? = 0 configure:16015: ./conftest configure:16015: $? = 0 configure:16029: result: 2 configure:16043: checking size of int configure:16048: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:16048: $? = 0 configure:16048: ./conftest configure:16048: $? = 0 configure:16062: result: 4 configure:16076: checking size of long configure:16081: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:16081: $? = 0 configure:16081: ./conftest configure:16081: $? = 0 configure:16095: result: 8 configure:16109: checking size of float configure:16114: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:16114: $? = 0 configure:16114: ./conftest configure:16114: $? = 0 configure:16128: result: 4 configure:16142: checking size of double configure:16147: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:16147: $? = 0 configure:16147: ./conftest configure:16147: $? = 0 configure:16161: result: 8 configure:16175: checking size of off_t configure:16180: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:16180: $? = 0 configure:16180: ./conftest configure:16180: $? = 0 configure:16194: result: 8 configure:16208: checking size of size_t configure:16213: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:16213: $? = 0 configure:16213: ./conftest configure:16213: $? = 0 configure:16227: result: 8 configure:16239: checking for library containing deflate configure:16270: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lhdf5_hl -lhdf5 -lz >&5 configure:16270: $? = 0 configure:16287: result: none required configure:16302: checking for floor in -lm configure:16327: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lm -lhdf5_hl -lhdf5 -lz >&5 configure:16327: $? = 0 configure:16336: result: yes configure:16359: checking for library containing SZ_Compress configure:16390: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lm -lhdf5_hl -lhdf5 -lz >&5 /usr/lib64/gcc/x86_64-suse-linux/7/../../../../x86_64-suse-linux/bin/ld: /tmp/iccwCFVCY.o: in function `main': /lfs/h1/ops/para/packages/nwps.v1.4.10/lib/sorc/netcdf-4.2/conftest.c:105: undefined reference to `SZ_Compress' configure:16390: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.2" | #define PACKAGE_STRING "netCDF 4.2" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf" | #define VERSION "4.2" | #define NCIO_MINBLOCKSIZE 256 | #define USE_FSYNC 1 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define HAVE_CURLOPT_KEYPASSWD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_DIRENT_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_VPRINTF 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRCHR 1 | #define HAVE_STRRCHR 1 | #define HAVE_STRCAT 1 | #define HAVE_STRCPY 1 | #define HAVE_STRDUP 1 | #define HAVE_STRCASECMP 1 | #define HAVE_STRTOD 1 | #define HAVE_STRTOLL 1 | #define HAVE_STRTOULL 1 | #define HAVE_STRSTR 1 | #define HAVE_MKSTEMP 1 | #define HAVE_GETPID 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_FSYNC 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_SIGNBIT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_OFF_T 8 | #define SIZEOF_SIZE_T 8 | #define HAVE_LIBM 1 | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char SZ_Compress (); | int | main () | { | return SZ_Compress (); | ; | return 0; | } configure:16390: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lszip -lm -lhdf5_hl -lhdf5 -lz >&5 /usr/lib64/gcc/x86_64-suse-linux/7/../../../../x86_64-suse-linux/bin/ld: cannot find -lszip: No such file or directory configure:16390: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.2" | #define PACKAGE_STRING "netCDF 4.2" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf" | #define VERSION "4.2" | #define NCIO_MINBLOCKSIZE 256 | #define USE_FSYNC 1 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define HAVE_CURLOPT_KEYPASSWD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_DIRENT_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_VPRINTF 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRCHR 1 | #define HAVE_STRRCHR 1 | #define HAVE_STRCAT 1 | #define HAVE_STRCPY 1 | #define HAVE_STRDUP 1 | #define HAVE_STRCASECMP 1 | #define HAVE_STRTOD 1 | #define HAVE_STRTOLL 1 | #define HAVE_STRTOULL 1 | #define HAVE_STRSTR 1 | #define HAVE_MKSTEMP 1 | #define HAVE_GETPID 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_FSYNC 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_SIGNBIT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_OFF_T 8 | #define SIZEOF_SIZE_T 8 | #define HAVE_LIBM 1 | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char SZ_Compress (); | int | main () | { | return SZ_Compress (); | ; | return 0; | } configure:16390: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lsz -lm -lhdf5_hl -lhdf5 -lz >&5 /usr/lib64/gcc/x86_64-suse-linux/7/../../../../x86_64-suse-linux/bin/ld: cannot find -lsz: No such file or directory configure:16390: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.2" | #define PACKAGE_STRING "netCDF 4.2" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf" | #define VERSION "4.2" | #define NCIO_MINBLOCKSIZE 256 | #define USE_FSYNC 1 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define HAVE_CURLOPT_KEYPASSWD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_DIRENT_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_VPRINTF 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRCHR 1 | #define HAVE_STRRCHR 1 | #define HAVE_STRCAT 1 | #define HAVE_STRCPY 1 | #define HAVE_STRDUP 1 | #define HAVE_STRCASECMP 1 | #define HAVE_STRTOD 1 | #define HAVE_STRTOLL 1 | #define HAVE_STRTOULL 1 | #define HAVE_STRSTR 1 | #define HAVE_MKSTEMP 1 | #define HAVE_GETPID 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_FSYNC 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_SIGNBIT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_OFF_T 8 | #define SIZEOF_SIZE_T 8 | #define HAVE_LIBM 1 | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char SZ_Compress (); | int | main () | { | return SZ_Compress (); | ; | return 0; | } configure:16407: result: no configure:16418: checking for library containing H5Fflush configure:16449: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lm -lhdf5_hl -lhdf5 -lz >&5 configure:16449: $? = 0 configure:16466: result: none required configure:16476: checking for library containing H5DSis_scale configure:16507: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lm -lhdf5_hl -lhdf5 -lz >&5 configure:16507: $? = 0 configure:16524: result: none required configure:16537: checking hdf5.h usability configure:16537: cc -c -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c >&5 configure:16537: $? = 0 configure:16537: result: yes configure:16537: checking hdf5.h presence configure:16537: cc -E -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include conftest.c configure:16537: $? = 0 configure:16537: result: yes configure:16537: checking for hdf5.h configure:16537: result: yes configure:16552: checking for H5Pget_fapl_mpiposix configure:16552: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lm -lhdf5_hl -lhdf5 -lz >&5 /usr/lib64/gcc/x86_64-suse-linux/7/../../../../x86_64-suse-linux/bin/ld: /tmp/iccHWbEfG.o: in function `main': /lfs/h1/ops/para/packages/nwps.v1.4.10/lib/sorc/netcdf-4.2/conftest.c:129: undefined reference to `H5Pget_fapl_mpiposix' configure:16552: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.2" | #define PACKAGE_STRING "netCDF 4.2" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf" | #define VERSION "4.2" | #define NCIO_MINBLOCKSIZE 256 | #define USE_FSYNC 1 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define HAVE_CURLOPT_KEYPASSWD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_DIRENT_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_VPRINTF 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRCHR 1 | #define HAVE_STRRCHR 1 | #define HAVE_STRCAT 1 | #define HAVE_STRCPY 1 | #define HAVE_STRDUP 1 | #define HAVE_STRCASECMP 1 | #define HAVE_STRTOD 1 | #define HAVE_STRTOLL 1 | #define HAVE_STRTOULL 1 | #define HAVE_STRSTR 1 | #define HAVE_MKSTEMP 1 | #define HAVE_GETPID 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_FSYNC 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_SIGNBIT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_OFF_T 8 | #define SIZEOF_SIZE_T 8 | #define HAVE_LIBM 1 | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | /* Define H5Pget_fapl_mpiposix to an innocuous variant, in case declares H5Pget_fapl_mpiposix. | For example, HP-UX 11i declares gettimeofday. */ | #define H5Pget_fapl_mpiposix innocuous_H5Pget_fapl_mpiposix | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char H5Pget_fapl_mpiposix (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef H5Pget_fapl_mpiposix | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char H5Pget_fapl_mpiposix (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_H5Pget_fapl_mpiposix || defined __stub___H5Pget_fapl_mpiposix | choke me | #endif | | int | main () | { | return H5Pget_fapl_mpiposix (); | ; | return 0; | } configure:16552: result: no configure:16552: checking for H5Pget_fapl_mpio configure:16552: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lm -lhdf5_hl -lhdf5 -lz >&5 /usr/lib64/gcc/x86_64-suse-linux/7/../../../../x86_64-suse-linux/bin/ld: /tmp/icco3TKjf.o: in function `main': /lfs/h1/ops/para/packages/nwps.v1.4.10/lib/sorc/netcdf-4.2/conftest.c:129: undefined reference to `H5Pget_fapl_mpio' configure:16552: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.2" | #define PACKAGE_STRING "netCDF 4.2" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf" | #define VERSION "4.2" | #define NCIO_MINBLOCKSIZE 256 | #define USE_FSYNC 1 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define HAVE_CURLOPT_KEYPASSWD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_DIRENT_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_VPRINTF 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRCHR 1 | #define HAVE_STRRCHR 1 | #define HAVE_STRCAT 1 | #define HAVE_STRCPY 1 | #define HAVE_STRDUP 1 | #define HAVE_STRCASECMP 1 | #define HAVE_STRTOD 1 | #define HAVE_STRTOLL 1 | #define HAVE_STRTOULL 1 | #define HAVE_STRSTR 1 | #define HAVE_MKSTEMP 1 | #define HAVE_GETPID 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_FSYNC 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_SIGNBIT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_OFF_T 8 | #define SIZEOF_SIZE_T 8 | #define HAVE_LIBM 1 | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | /* Define H5Pget_fapl_mpio to an innocuous variant, in case declares H5Pget_fapl_mpio. | For example, HP-UX 11i declares gettimeofday. */ | #define H5Pget_fapl_mpio innocuous_H5Pget_fapl_mpio | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char H5Pget_fapl_mpio (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef H5Pget_fapl_mpio | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char H5Pget_fapl_mpio (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_H5Pget_fapl_mpio || defined __stub___H5Pget_fapl_mpio | choke me | #endif | | int | main () | { | return H5Pget_fapl_mpio (); | ; | return 0; | } configure:16552: result: no configure:16552: checking for H5Pset_deflate configure:16552: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lm -lhdf5_hl -lhdf5 -lz >&5 configure:16552: $? = 0 configure:16552: result: yes configure:16552: checking for H5Z_SZIP configure:16552: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lm -lhdf5_hl -lhdf5 -lz >&5 /usr/lib64/gcc/x86_64-suse-linux/7/../../../../x86_64-suse-linux/bin/ld: /tmp/iccKo1hL5.o: in function `main': /lfs/h1/ops/para/packages/nwps.v1.4.10/lib/sorc/netcdf-4.2/conftest.c:130: undefined reference to `H5Z_SZIP' configure:16552: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "netCDF" | #define PACKAGE_TARNAME "netcdf" | #define PACKAGE_VERSION "4.2" | #define PACKAGE_STRING "netCDF 4.2" | #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" | #define PACKAGE_URL "" | #define PACKAGE "netcdf" | #define VERSION "4.2" | #define NCIO_MINBLOCKSIZE 256 | #define USE_FSYNC 1 | #define DEFAULT_CHUNK_SIZE 4194304 | #define MAX_DEFAULT_CACHE_SIZE 67108864 | #define DEFAULT_CHUNKS_IN_CACHE 10 | #define CHUNK_CACHE_SIZE 4194304 | #define CHUNK_CACHE_NELEMS 1009 | #define CHUNK_CACHE_PREEMPTION 0.75 | #define USE_EXTREME_NUMBERS 1 | #define TEMP_LARGE "." | #define HAVE_CURLOPT_KEYPASSWD 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define HAVE_SYS_PARAM_H 1 | #define HAVE_DIRENT_H 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_WAIT_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_LOCALE_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_CTYPE_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_GETOPT_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_VPRINTF 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_STRERROR 1 | #define HAVE_SNPRINTF 1 | #define HAVE_STRCHR 1 | #define HAVE_STRRCHR 1 | #define HAVE_STRCAT 1 | #define HAVE_STRCPY 1 | #define HAVE_STRDUP 1 | #define HAVE_STRCASECMP 1 | #define HAVE_STRTOD 1 | #define HAVE_STRTOLL 1 | #define HAVE_STRTOULL 1 | #define HAVE_STRSTR 1 | #define HAVE_MKSTEMP 1 | #define HAVE_GETPID 1 | #define HAVE_GETRLIMIT 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_FSYNC 1 | #define HAVE_ALLOCA_H 1 | #define HAVE_ALLOCA 1 | #define HAVE_DECL_ISNAN 1 | #define HAVE_DECL_ISINF 1 | #define HAVE_DECL_ISFINITE 1 | #define HAVE_DECL_SIGNBIT 1 | #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 | #define HAVE_ST_BLKSIZE 1 | #define HAVE_SSIZE_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define SIZEOF_OFF_T 8 | #define SIZEOF_SIZE_T 8 | #define HAVE_LIBM 1 | #define USE_NETCDF4 1 | #define H5_USE_16_API 1 | #define HAVE_HDF5_H 1 | #define HAVE_H5PSET_DEFLATE 1 | /* end confdefs.h. */ | /* Define H5Z_SZIP to an innocuous variant, in case declares H5Z_SZIP. | For example, HP-UX 11i declares gettimeofday. */ | #define H5Z_SZIP innocuous_H5Z_SZIP | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char H5Z_SZIP (); below. | Prefer to if __STDC__ is defined, since | exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include | #else | # include | #endif | | #undef H5Z_SZIP | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char H5Z_SZIP (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_H5Z_SZIP || defined __stub___H5Z_SZIP | choke me | #endif | | int | main () | { | return H5Z_SZIP (); | ; | return 0; | } configure:16552: result: no configure:16640: checking whether parallel I/O features are to be included configure:16642: result: no configure:16953: checking for unsigned long long int configure:16992: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lm -lhdf5_hl -lhdf5 -lz >&5 configure:16992: $? = 0 configure:17001: result: yes configure:17011: checking for long long int configure:17049: cc -o conftest -g -O2 -I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include -L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib conftest.c -lm -lhdf5_hl -lhdf5 -lz >&5 configure:17049: $? = 0 configure:17049: ./conftest configure:17049: $? = 0 configure:17061: result: yes configure:17070: checking for unsigned long long int configure:17118: result: yes configure:17135: checking what to call the output of the ftpbin target configure:17141: result: binary-netcdf-4.2.tar ftn CC configure:17144: checking binary distribution directory configure:17152: result: /home/ftp/pub/binary/dummy_system configure:17186: checking value of LIBS configure:17188: result: -lm -lhdf5_hl -lhdf5 -lz configure:17246: generating header files and makefiles configure:17359: checking that generated files are newer than configure configure:17365: result: done configure:17517: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by netCDF config.status 4.2, which was generated by GNU Autoconf 2.69. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on dlogin08 config.status:1282: creating Makefile config.status:1282: creating nc-config config.status:1282: creating netcdf.pc config.status:1282: creating include/Makefile config.status:1282: creating h5_test/Makefile config.status:1282: creating man4/Makefile config.status:1282: creating man4/images/Makefile config.status:1282: creating libsrc/Makefile config.status:1282: creating libsrc4/Makefile config.status:1282: creating nctest/Makefile config.status:1282: creating nc_test4/Makefile config.status:1282: creating nc_test/Makefile config.status:1282: creating ncdump/Makefile config.status:1282: creating ncgen3/Makefile config.status:1282: creating ncgen/Makefile config.status:1282: creating examples/Makefile config.status:1282: creating examples/C/Makefile config.status:1282: creating examples/CDL/Makefile config.status:1282: creating win32/Makefile config.status:1282: creating win32/NET/Makefile config.status:1282: creating win32/NET/libsrc/Makefile config.status:1282: creating win32/NET/ncdump/Makefile config.status:1282: creating win32/NET/ncgen/Makefile config.status:1282: creating win32/NET/examples/Makefile config.status:1282: creating win32/NET/nctest/Makefile config.status:1282: creating win32/NET/nc_test/Makefile config.status:1282: creating oc/Makefile config.status:1282: creating libdap2/Makefile config.status:1282: creating libcdmr/Makefile config.status:1282: creating librpc/Makefile config.status:1282: creating libdispatch/Makefile config.status:1282: creating liblib/Makefile config.status:1282: creating ncdump/cdl4/Makefile config.status:1282: creating ncdump/expected4/Makefile config.status:1282: creating ncdap_test/Makefile config.status:1282: creating ncdap_test/testdata3/Makefile config.status:1282: creating ncdap_test/expected3/Makefile config.status:1282: creating ncdap_test/expected4/Makefile config.status:1282: creating ncdap_test/expectremote3/Makefile config.status:1282: creating ncdap_test/expectremote4/Makefile config.status:1282: creating config.h config.status:1511: executing depfiles commands config.status:1511: executing libtool commands configure:19740: WARNING: unrecognized options: --enable-cdf5 ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-pc-linux-gnu ac_cv_c_bigendian=no ac_cv_c_char_unsigned=no ac_cv_c_compiler_gnu=yes ac_cv_c_const=yes ac_cv_c_ieeefloat=yes ac_cv_env_CC_set=set ac_cv_env_CC_value=cc ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_set=set ac_cv_env_CPPFLAGS_value=-I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_LDFLAGS_set=set ac_cv_env_LDFLAGS_value='-L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib' ac_cv_env_LIBS_set=set ac_cv_env_LIBS_value='-lhdf5_hl -lhdf5 -lz' ac_cv_env_LT_SYS_LIBRARY_PATH_set= ac_cv_env_LT_SYS_LIBRARY_PATH_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_func_H5Pget_fapl_mpio=no ac_cv_func_H5Pget_fapl_mpiposix=no ac_cv_func_H5Pset_deflate=yes ac_cv_func_H5Z_SZIP=no ac_cv_func_MPI_Comm_f2c=no ac_cv_func__doprnt=no ac_cv_func_alloca_works=yes ac_cv_func_fsync=yes ac_cv_func_getpid=yes ac_cv_func_getrlimit=yes ac_cv_func_gettimeofday=yes ac_cv_func_mkstemp=yes ac_cv_func_snprintf=yes ac_cv_func_strcasecmp=yes ac_cv_func_strcat=yes ac_cv_func_strchr=yes ac_cv_func_strcpy=yes ac_cv_func_strdup=yes ac_cv_func_strerror=yes ac_cv_func_strlcat=no ac_cv_func_strrchr=yes ac_cv_func_strstr=yes ac_cv_func_strtod=yes ac_cv_func_strtoll=yes ac_cv_func_strtoull=yes ac_cv_func_vprintf=yes ac_cv_have_decl_isfinite=yes ac_cv_have_decl_isinf=yes ac_cv_have_decl_isnan=yes ac_cv_have_decl_signbit=yes ac_cv_header_ctype_h=yes ac_cv_header_dirent_dirent_h=yes ac_cv_header_dlfcn_h=yes ac_cv_header_errno_h=yes ac_cv_header_fcntl_h=yes ac_cv_header_getopt_h=yes ac_cv_header_hdf5_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_locale_h=yes ac_cv_header_malloc_h=yes ac_cv_header_memory_h=yes ac_cv_header_stdarg_h=yes ac_cv_header_stdbool_h=yes ac_cv_header_stdc=yes ac_cv_header_stdint_h=yes ac_cv_header_stdio_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_param_h=yes ac_cv_header_sys_resource_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_time_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_sys_wait_h=yes ac_cv_header_time=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-pc-linux-gnu ac_cv_lib_curl_curl_easy_setopt=yes ac_cv_lib_m_floor=yes ac_cv_member_struct_stat_st_blksize=yes ac_cv_objext=o ac_cv_path_EGREP='/u/ops.para/bin/grep -E' ac_cv_path_FGREP='/u/ops.para/bin/grep -F' ac_cv_path_GREP=/u/ops.para/bin/grep ac_cv_path_SED=/u/ops.para/bin/sed ac_cv_path_install='/usr/bin/install -c' ac_cv_path_lt_DD=/u/ops.para/bin/dd ac_cv_path_mkdir=/u/ops.para/bin/mkdir ac_cv_prog_AWK=gawk ac_cv_prog_CPP='cc -E' ac_cv_prog_DOXYGEN=doxygen ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_CC=cc ac_cv_prog_ac_ct_MANIFEST_TOOL=mt ac_cv_prog_ac_ct_OBJDUMP=objdump ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_make_make_set=yes ac_cv_search_H5DSis_scale='none required' ac_cv_search_H5Fflush='none required' ac_cv_search_SZ_Compress=no ac_cv_search_deflate='none required' ac_cv_search_opendir='none required' ac_cv_sizeof_double=8 ac_cv_sizeof_float=4 ac_cv_sizeof_int=4 ac_cv_sizeof_long=8 ac_cv_sizeof_off_t=8 ac_cv_sizeof_short=2 ac_cv_sizeof_size_t=8 ac_cv_sys_file_offset_bits=no ac_cv_sys_largefile_CC=no ac_cv_target=x86_64-pc-linux-gnu ac_cv_type__Bool=yes ac_cv_type_long_long_int=yes ac_cv_type_longlong=no ac_cv_type_off_t=yes ac_cv_type_ptrdiff_t=yes ac_cv_type_size_t=yes ac_cv_type_ssize_t=yes ac_cv_type_uchar=no ac_cv_type_unsigned_long_long_int=yes ac_cv_working_alloca_h=yes am_cv_CC_dependencies_compiler_type=gcc3 am_cv_make_support_nested_variables=yes am_cv_prog_cc_c_o=yes lt_cv_ar_at_file=@ lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/usr/x86_64-suse-linux/bin/ld lt_cv_path_NM='/usr/bin/nm -B' lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_pic='-fPIC -DPIC' lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_rtti_exceptions=yes lt_cv_prog_compiler_static_works=no lt_cv_prog_gnu_ld=yes lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_shlibpath_overrides_runpath=yes lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(lib.*\)$/ {"\1", (void *) \&\1},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"lib\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_global_symbol_to_import= lt_cv_sys_max_cmd_len=3458764513820540925 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop lt_cv_truncate_bin='/u/ops.para/bin/dd bs=4096 count=1' ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /lfs/h1/ops/para/packages/nwps.v1.4.10/lib/sorc/netcdf-4.2/missing aclocal-1.15' ALLOCA='' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='1' AM_V='$(V)' AR='ar' AS='as' AUTOCONF='${SHELL} /lfs/h1/ops/para/packages/nwps.v1.4.10/lib/sorc/netcdf-4.2/missing autoconf' AUTOHEADER='${SHELL} /lfs/h1/ops/para/packages/nwps.v1.4.10/lib/sorc/netcdf-4.2/missing autoheader' AUTOMAKE='${SHELL} /lfs/h1/ops/para/packages/nwps.v1.4.10/lib/sorc/netcdf-4.2/missing automake-1.15' AWK='gawk' BINFILE_NAME='binary-netcdf-4.2.tar' BUILD_BENCHMARKS_FALSE='' BUILD_BENCHMARKS_TRUE='#' BUILD_CDMREMOTE_FALSE='' BUILD_CDMREMOTE_TRUE='#' BUILD_DAP_FALSE='' BUILD_DAP_TRUE='#' BUILD_DLL_FALSE='' BUILD_DLL_TRUE='#' BUILD_DOCS_FALSE='' BUILD_DOCS_TRUE='#' BUILD_EXAMPLES_FALSE='#' BUILD_EXAMPLES_TRUE='' BUILD_INTERNAL_DOCS='no' BUILD_PARALLEL_FALSE='' BUILD_PARALLEL_TRUE='#' BUILD_RPC_FALSE='' BUILD_RPC_TRUE='#' BUILD_UTILITIES_FALSE='#' BUILD_UTILITIES_TRUE='' BUILD_V2_FALSE='#' BUILD_V2_TRUE='' CC='cc' CCDEPMODE='depmode=gcc3' CFLAGS='-g -O2' CPP='cc -E' CPPFLAGS='-I/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/include' CROSS_COMPILING_FALSE='' CROSS_COMPILING_TRUE='#' CYGPATH_W='echo' DEFS='-DHAVE_CONFIG_H' DEPDIR='.deps' DLLTOOL='false' DOXYGEN='doxygen' DSYMUTIL='' DUMPBIN='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/u/ops.para/bin/grep -E' ENABLE_DAP_LONG_TESTS_FALSE='' ENABLE_DAP_LONG_TESTS_TRUE='#' ENABLE_DAP_REMOTE_TESTS_FALSE='' ENABLE_DAP_REMOTE_TESTS_TRUE='#' EXEEXT='' EXTRA_EXAMPLE_TESTS_FALSE='' EXTRA_EXAMPLE_TESTS_TRUE='#' EXTRA_TESTS_FALSE='' EXTRA_TESTS_TRUE='#' FGREP='/u/ops.para/bin/grep -F' FTPBINDIR='/home/ftp/pub/binary/dummy_system' GREP='/u/ops.para/bin/grep' HAS_DAP='no' HAS_HDF4='no' HAS_HDF5='yes' HAS_NC2='yes' HAS_NC4='yes' HAS_PNETCDF='no' HAS_SZLIB='' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' INTERNAL_OCLIB_FALSE='#' INTERNAL_OCLIB_TRUE='' LARGE_FILE_TESTS_FALSE='' LARGE_FILE_TESTS_TRUE='#' LD='/usr/x86_64-suse-linux/bin/ld -m elf_x86_64' LDFLAGS='-L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib' LIBOBJS='' LIBS='-lm -lhdf5_hl -lhdf5 -lz' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIPO='' LN_S='ln -s' LTLIBOBJS='' LT_SYS_LIBRARY_PATH='' MAKEINFO='${SHELL} /lfs/h1/ops/para/packages/nwps.v1.4.10/lib/sorc/netcdf-4.2/missing makeinfo' MANIFEST_TOOL=':' MKDIR_P='/u/ops.para/bin/mkdir -p' NC_LIBS='-L/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/hdf5/1.8.9/lib -L/apps/spack/zlib/1.2.11/intel/19.1.3.304/hjotqkckeoyt6j6tibalwzrlfljcjtdh/lib -lnetcdf -lm -lhdf5_hl -lhdf5 -lz' NM='/usr/bin/nm -B' NMEDIT='' OBJDUMP='objdump' OBJEXT='o' OTOOL64='' OTOOL='' PACKAGE='netcdf' PACKAGE_BUGREPORT='support-netcdf@unidata.ucar.edu' PACKAGE_NAME='netCDF' PACKAGE_STRING='netCDF 4.2' PACKAGE_TARNAME='netcdf' PACKAGE_URL='' PACKAGE_VERSION='4.2' PATH_SEPARATOR=':' RANLIB='ranlib' SED='/u/ops.para/bin/sed' SET_MAKE='' SHELL='/bin/sh' STRIP='strip' TEST_PARALLEL_FALSE='' TEST_PARALLEL_TRUE='#' USE_DAP_FALSE='' USE_DAP_TRUE='#' USE_DISPATCH_FALSE='' USE_DISPATCH_TRUE='#' USE_FFIO_FALSE='' USE_FFIO_TRUE='#' USE_HDF4_FALSE='' USE_HDF4_FILE_TESTS_FALSE='' USE_HDF4_FILE_TESTS_TRUE='#' USE_HDF4_TRUE='#' USE_LOGGING_FALSE='' USE_LOGGING_TRUE='#' USE_NETCDF4_FALSE='#' USE_NETCDF4_TRUE='' USE_NEWIO_FALSE='' USE_NEWIO_TRUE='#' USE_PNETCDF_DIR_FALSE='' USE_PNETCDF_DIR_TRUE='#' USE_PNETCDF_FALSE='' USE_PNETCDF_TRUE='#' USE_RENAMEV3_FALSE='#' USE_RENAMEV3_TRUE='' USE_SZIP_FALSE='' USE_SZIP_TRUE='#' USE_VALGRIND_TESTS_FALSE='' USE_VALGRIND_TESTS_TRUE='#' VERSION='4.2' ac_ct_AR='ar' ac_ct_CC='cc' ac_ct_DUMPBIN='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='#' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__include='include' am__isrc='' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='$${TAR-tar} chof - "$$tardir"' am__untar='$${TAR-tar} xf -' bindir='${exec_prefix}/bin' build='x86_64-pc-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='pc' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='${prefix}' host='x86_64-pc-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='pc' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /lfs/h1/ops/para/packages/nwps.v1.4.10/lib/sorc/netcdf-4.2/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='$(MKDIR_P)' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/lfs/h1/ops/para/packages/nwps.v1.4.10/lib/netcdf/4.2' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target='x86_64-pc-linux-gnu' target_alias='' target_cpu='x86_64' target_os='linux-gnu' target_vendor='pc' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "netCDF" #define PACKAGE_TARNAME "netcdf" #define PACKAGE_VERSION "4.2" #define PACKAGE_STRING "netCDF 4.2" #define PACKAGE_BUGREPORT "support-netcdf@unidata.ucar.edu" #define PACKAGE_URL "" #define PACKAGE "netcdf" #define VERSION "4.2" #define NCIO_MINBLOCKSIZE 256 #define USE_FSYNC 1 #define DEFAULT_CHUNK_SIZE 4194304 #define MAX_DEFAULT_CACHE_SIZE 67108864 #define DEFAULT_CHUNKS_IN_CACHE 10 #define CHUNK_CACHE_SIZE 4194304 #define CHUNK_CACHE_NELEMS 1009 #define CHUNK_CACHE_PREEMPTION 0.75 #define USE_EXTREME_NUMBERS 1 #define TEMP_LARGE "." #define HAVE_CURLOPT_KEYPASSWD 1 #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define HAVE_SYS_PARAM_H 1 #define HAVE_DIRENT_H 1 #define STDC_HEADERS 1 #define HAVE_SYS_WAIT_H 1 #define TIME_WITH_SYS_TIME 1 #define HAVE_LOCALE_H 1 #define HAVE_STDIO_H 1 #define HAVE_STDARG_H 1 #define HAVE_ERRNO_H 1 #define HAVE_CTYPE_H 1 #define HAVE_FCNTL_H 1 #define HAVE_MALLOC_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_STRINGS_H 1 #define HAVE_UNISTD_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_GETOPT_H 1 #define HAVE_SYS_TIME_H 1 #define HAVE_SYS_RESOURCE_H 1 #define HAVE_VPRINTF 1 #define HAVE__BOOL 1 #define HAVE_STDBOOL_H 1 #define HAVE_STRERROR 1 #define HAVE_SNPRINTF 1 #define HAVE_STRCHR 1 #define HAVE_STRRCHR 1 #define HAVE_STRCAT 1 #define HAVE_STRCPY 1 #define HAVE_STRDUP 1 #define HAVE_STRCASECMP 1 #define HAVE_STRTOD 1 #define HAVE_STRTOLL 1 #define HAVE_STRTOULL 1 #define HAVE_STRSTR 1 #define HAVE_MKSTEMP 1 #define HAVE_GETPID 1 #define HAVE_GETRLIMIT 1 #define HAVE_GETTIMEOFDAY 1 #define HAVE_FSYNC 1 #define HAVE_ALLOCA_H 1 #define HAVE_ALLOCA 1 #define HAVE_DECL_ISNAN 1 #define HAVE_DECL_ISINF 1 #define HAVE_DECL_ISFINITE 1 #define HAVE_DECL_SIGNBIT 1 #define HAVE_STRUCT_STAT_ST_BLKSIZE 1 #define HAVE_ST_BLKSIZE 1 #define HAVE_SSIZE_T 1 #define HAVE_PTRDIFF_T 1 #define SIZEOF_SHORT 2 #define SIZEOF_INT 4 #define SIZEOF_LONG 8 #define SIZEOF_FLOAT 4 #define SIZEOF_DOUBLE 8 #define SIZEOF_OFF_T 8 #define SIZEOF_SIZE_T 8 #define HAVE_LIBM 1 #define USE_NETCDF4 1 #define H5_USE_16_API 1 #define HAVE_HDF5_H 1 #define HAVE_H5PSET_DEFLATE 1 #define USE_ZLIB 1 #define HAVE_UNSIGNED_LONG_LONG_INT 1 #define HAVE_LONG_LONG_INT 1 #define HAVE_UNSIGNED_LONG_LONG_INT 1 configure: exit 0