#!/bin/bash
set -xa

########################################
# NOS_OFS_OBS
# To prepare for the observation input file for data assimilation 
########################################
export HOMEnos=${HOMEnos:-${PACKAGEROOT}/nosofs.${nosofs_ver:?}}
######################################################
# The following two variable could be defined in the
# loadleveler submission script (the sms script), if
# not they will take the default values which is set
# for the NCO running enviroment
#######################################################
#export RUN_ENVIR=${RUN_ENVIR:-nco}

###################################
# Specify NET and RUN Name and model
####################################
#export OFS=${OFS:-wcofs }
export NET=${NET:-nosofs}
export RUN=${RUN:-$OFS}
export PREFIXNOS=${PREFIXNOS:-$OFS}
# hardcoded SENDDBN = NO for wcofs_da and wcofs_free
export SENDDBN=${SENDDBN:-NO}
if [ "${OFS,,}" == "wcofs_da" -o "${OFS,,}" == "wcofs_free" ]; then
   export SENDDBN='NO'
fi

###############################################################
# This block can be modified for different Production test
# environment. This is used for operational testings
# Commented by SK 20201209
###############################################################
export PS4='$SECONDS + '
date

####################################
# obtain unique process id (pid) and make temp directory
####################################
export pid=$$
##export DATAROOT=${DATAROOT:-/lfs/h1/ops/prod/tmp}
##export DATA=${DATA:-$DATAROOT/${job}.${pid}}
#export DATA=${DATA:-${DATAROOT:?}/nos_${OFS}_obs_${cyc}_$envir}
export DATA=${DATA:-${DATAROOT:?}/${jobid:?}}

if [ ! -d $DATA ]
then
  mkdir -p $DATA
  cd $DATA
else
  cd $DATA
  rm -fr $DATA/*
fi

export cycle=t${cyc}z

############################################
#   Determine Job Output Name on System
############################################
# JY - 08/19/22 turned off the following two lines as the jobid is got in upstream setting
# export outid="LL$job"
# export jobid="${outid}.o${pid}"

####################################
# Specify Execution Areas
####################################
export EXECnos=${EXECnos:-${HOMEnos}/exec}
export FIXnos=${FIXnos:-${HOMEnos}/fix/shared}
export FIXofs=${FIXofs:-${HOMEnos}/fix/${OFS}}
export PARMnos=${PARMnos:-${HOMEnos}/parm}
export USHnos=${USHnos:-${HOMEnos}/ush}
export SCRIPTSnos=${SCRIPTSnos:-${HOMEnos}/scripts}
export PYnos=${PYnos:-${HOMEnos}/ush/pysh}
export COMINrtofs_2d=${COMINrtofs_2d:-$(compath.py prod/rtofs/${rtofs_ver})}
export COMINrtofs_3d=${COMINrtofs_3d:-$(compath.py prod/rtofs/${rtofs_ver})}


###########################################
# Run setpdy and initialize PDY variables
###########################################
sh setpdy.sh
. ./PDY

#PDY=20240119
##############################################
# Define COM directories
##############################################
export COMROOT=${COMROOT:-/lfs/h1/ops/${envir}/com}
export DCOMROOT=${DCOMROOT:-/lfs/h1/ops/${envir}/dcom}
export COMIN=${COMIN:-$(compath.py ${NET}/${nosofs_ver})/${RUN}.${PDY}}
export COMOUTroot=${COMOUTroot:-$(compath.py -o ${NET}/${nosofs_ver})}
export COMOUT=${COMOUT:-$(compath.py -o ${NET}/${nosofs_ver})/${RUN}.${PDY}}

mkdir -m 775 -p $COMOUT

##############################################
### Set up input data path
#export DCOMROOTdev=${DCOMROOTdev:-/lfs/h1/ops/canned/dcom}
export DCOMROOT=${DCOMROOT:-/lfs/h1/ops/prod/dcom}
export DCOMINsst=${DCOMROOT}
export DCOMINhf=${DCOMROOT}
export DCOMINssh=${DCOMROOT}

export DCOMINsst=${DCOMINsst:-${DCOMROOT}}
export DCOMINhf=${DCOMINhf:-${DCOMROOT}}
export DCOMINssh=${DCOMINssh:-${DCOMROOT}}

##############################################
####  Log File To Sys Report
export nosjlogfile=${nosjlogfile:-${COMOUT}/${PREFIXNOS}.${cycle}.${PDY}.jlogfile.log} 
export cormslogfile=${cormslogfile:-${COMOUT}/${PREFIXNOS}.${cycle}.${PDY}.corms.log}
#env  

########################################################
# Execute the script.
########################################################
#   echo "push model data to CO-OPS ftp server of tidepool"
$SCRIPTSnos/exnos_ofs_obs.sh
########################################################
postmsg "$nosjlogfile" "$0 completed normally"

##############################
# Remove the Temporary working directory
##############################
if [ "${KEEPDATA^^}" != YES ]; then
  rm -rf $DATA
fi
if [ $envir == 'dev' ]; then
  RPTDIR=/lfs/h1/nos/ptmp/$LOGNAME/rpt/${nosofs_ver}
  cp -p ${RPTDIR}/${OFS}_obs_${cyc}.out ${RPTDIR}/${OFS}_obs_${cyc}.out.${pbsid}
  cp -p ${RPTDIR}/${OFS}_obs_${cyc}.err ${RPTDIR}/${OFS}_obs_${cyc}.err.${pbsid}
fi
date