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Manual edits will be lost! @article{redi1982, title = {Oceanic {Isopycnal} {Mixing} by {Coordinate} {Rotation}}, volume = {12}, issn = {0022-3670}, url = {http://journals.ametsoc.org/doi/abs/10.1175/1520-0485%281982%29012%3C1154%3AOIMBCR%3E2.0.CO%3B2}, doi = {10.1175/1520-0485(1982)012<1154:OIMBCR>2.0.CO;2}, number = {10}, urldate = {2016-02-05}, journal = {Journal of Physical Oceanography}, author = {Redi, Martha H.}, month = oct, year = {1982}, pages = {1154--1158} } @article{bleck2002, title = {An oceanic general circulation model framed in hybrid isopycnic-{Cartesian} coordinates}, volume = {4}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500301000129}, doi = {10.1016/S1463-5003(01)00012-9}, publisher = {Elsevier {BV}}, number = {1}, urldate = {2016-02-04}, journal = {Ocean Modelling}, author = {Bleck, Rainer}, year = {2002}, pages = {55--88} } @article{chassignet2003, title = {North {Atlantic} {Simulations} with the {Hybrid} {Coordinate} {Ocean} {Model} ({HYCOM}): {Impact} of the {Vertical} {Coordinate} {Choice}, {Reference} {Pressure}, and {Thermobaricity}}, volume = {33}, issn = {0022-3670}, shorttitle = {North {Atlantic} {Simulations} with the {Hybrid} {Coordinate} {Ocean} {Model} ({HYCOM})}, url = {http://journals.ametsoc.org/doi/full/10.1175/1520-0485%282003%29033%3C2504%3ANASWTH%3E2.0.CO%3B2}, doi = {10.1175/1520-0485(2003)033<2504:NASWTH>2.0.CO;2}, number = {12}, urldate = {2015-12-02}, journal = {Journal of Physical Oceanography}, author = {Chassignet, Eric P. and Smith, Linda T. and Halliwell, George R. and Bleck, Rainer}, month = dec, year = {2003}, pages = {2504--2526} } @article{martin2010, title = {Parameterizing the fresh-water flux from land ice to ocean with interactive icebergs in a coupled climate model}, volume = {34}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S146350031000065X}, doi = {10.1016/j.ocemod.2010.05.001}, number = {3-4}, urldate = {2016-04-29}, journal = {Ocean Modelling}, author = {Martin, T. and Adcroft, A.}, year = {2010}, keywords = {Antarctica, Calving, Coupled climate model, Deep-water formation, Fresh-water flux, Greenland, Icebergs, Southern Ocean}, pages = {111--124} } @article{ferrari2010, series = {The magic of modelling: {A} special volume commemorating the contributions of {Peter} {D}. {Killworth} - {Part} 2}, title = {A boundary-value problem for the parameterized mesoscale eddy transport}, volume = {32}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500310000065}, doi = {10.1016/j.ocemod.2010.01.004}, number = {3-4}, urldate = {2016-09-07}, journal = {Ocean Modelling}, author = {Ferrari, Raffaele and Griffies, Stephen M. and Nurser, A. J. George and Vallis, Geoffrey K.}, year = {2010}, keywords = {Eddy, Modelling, Ocean, Turbulence, mesoscale, parameterization}, pages = {143--156} } @article{leclair2011, title = {z{\textasciitilde}-{Coordinate}, an {Arbitrary} {Lagrangian}-{Eulerian} coordinate separating high and low frequency motions}, volume = {37}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500311000126}, doi = {10.1016/j.ocemod.2011.02.001}, number = {3-4}, urldate = {2016-10-05}, journal = {Ocean Modelling}, author = {Leclair, Matthieu and Madec, Gurvan}, year = {2011}, keywords = {ALE, Vertical coordinate, NEMO, Spurious diapycnal mixing}, pages = {139--152} } @article{hirt1997, title = {An {Arbitrary} {Lagrangian}-{Eulerian} {Computing} {Method} for {All} {Flow} {Speeds}}, volume = {135}, issn = {0021-9991}, url = {http://www.sciencedirect.com/science/article/pii/S0021999197957028}, doi = {10.1006/jcph.1997.5702}, number = {2}, urldate = {2016-10-05}, journal = {Journal of Computational Physics}, author = {Hirt, C. W. and Amsden, A. A. and Cook, J. L.}, month = aug, year = {1997}, pages = {203--216} } @article{davies2013, title = {Global map of solid {Earth} surface heat flow}, volume = {14}, issn = {1525-2027}, url = {http://onlinelibrary.wiley.com/doi/10.1002/ggge.20271/abstract}, doi = {10.1002/ggge.20271}, language = {en}, number = {10}, urldate = {2017-01-31}, journal = {Geochemistry, Geophysics, Geosystems}, author = {Davies, J. Huw}, month = oct, year = {2013}, keywords = {3015 Heat flow (benthic), 5418 Heat flow, 8120 Dynamics of lithosphere and mantle: general, 8130 Heat generation and transport, 8159 Rheology: crust and lithosphere, heat flow, heat flux, map, temperature, thermal}, pages = {4608--4622} } @article{fox-kemper2011, series = {Modelling and {Understanding} the {Ocean} {Mesoscale} and {Submesoscale}}, title = {Parameterization of mixed layer eddies. {III}: {Implementation} and impact in global ocean climate simulations}, volume = {39}, issn = {1463-5003}, shorttitle = {Parameterization of mixed layer eddies. {III}}, url = {http://www.sciencedirect.com/science/article/pii/S1463500310001290}, doi = {10.1016/j.ocemod.2010.09.002}, number = {1}, journal = {Ocean Modelling}, author = {Fox-Kemper, B. and Danabasoglu, G. and Ferrari, R. and Griffies, S. M. and Hallberg, R. W. and Holland, M. M. and Maltrud, M. E. and Peacock, S. and Samuels, B. L.}, month = jan, year = {2011}, keywords = {Submesoscale, Mixed layer, Boundary layer, Climate model, parameterization}, pages = {61--78} } @article{hallberg2001, title = {An {Exploration} of the {Role} of {Transient} {Eddies} in {Determining} the {Transport} of a {Zonally} {Reentrant} {Current}}, volume = {31}, issn = {0022-3670}, url = {http://journals.ametsoc.org/doi/abs/10.1175/1520-0485(2001)031%3C3312:AEOTRO%3E2.0.CO%3B2}, doi = {10.1175/1520-0485(2001)031<3312:AEOTRO>2.0.CO;2}, number = {11}, urldate = {2017-09-15}, journal = {Journal of Physical Oceanography}, author = {Hallberg, Robert and Gnanadesikan, Anand}, month = nov, year = {2001}, pages = {3312--3330} } @article{hewitt2017, title = {Will high-resolution global ocean models benefit coupled predictions on short-range to climate timescales?}, volume = {120}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500317301774}, doi = {10.1016/j.ocemod.2017.11.002}, journal = {Ocean Modelling}, author = {Hewitt, Helene T. and Bell, Michael J. and Chassignet, Eric P. and Czaja, Arnaud and Ferreira, David and Griffies, Stephen M. and Hyder, Pat and McClean, Julie L. and New, Adrian L. and Roberts, Malcolm J.}, month = dec, year = {2017}, keywords = {Atmosphere, Coupled, Ocean, Parameterisation, Resolution}, pages = {120--136} } @article{griffies2015, title = {Impacts on {Ocean} {Heat} from {Transient} {Mesoscale} {Eddies} in a {Hierarchy} of {Climate} {Models}}, volume = {28}, issn = {0894-8755}, url = {http://journals.ametsoc.org/doi/10.1175/JCLI-D-14-00353.1}, doi = {10.1175/JCLI-D-14-00353.1}, number = {3}, urldate = {2018-01-20}, journal = {Journal of Climate}, author = {Griffies, Stephen M. and Winton, Michael and Anderson, Whit G. and Benson, Rusty and Delworth, Thomas L. and Dufour, Carolina O. and Dunne, John P. and Goddard, Paul and Morrison, Adele K. and Rosati, Anthony and Wittenberg, Andrew T. and Yin, Jianjun and Zhang, Rong}, month = feb, year = {2015}, pages = {952--977} } @article{murray1996, title = {Explicit {Generation} of {Orthogonal} {Grids} for {Ocean} {Models}}, volume = {126}, issn = {0021-9991}, url = {http://www.sciencedirect.com/science/article/pii/S0021999196901369}, doi = {10.1006/jcph.1996.0136}, number = {2}, urldate = {2018-05-14}, journal = {Journal of Computational Physics}, author = {Murray, Ross J.}, month = jul, year = {1996}, pages = {251--273} } @article{arakawa1981, title = {A {Potential} {Enstrophy} and {Energy} {Conserving} {Scheme} for the {Shallow} {Water} {Equations}}, volume = {109}, issn = {0027-0644}, url = {https://journals.ametsoc.org/doi/abs/10.1175/1520-0493(1981)109%3C0018:APEAEC%3E2.0.CO%3B2}, doi = {10.1175/1520-0493(1981)109<0018:APEAEC>2.0.CO;2}, number = {1}, journal = {Monthly Weather Review}, author = {Arakawa, Akio and Lamb, Vivian R.}, month = jan, year = {1981}, pages = {18--36} } @article{arakawa1990, title = {Energy conserving and potential-enstrophy dissipating schemes for the shallow water equations}, author = {Arakawa, Akio and Yueh-Jiuan G. Hsu}, year = {1990}, journal = {Monthly Weather Review}, volume = {118}, pages = {1960--1969}, doi = {10.1175/1520-0493(1990)118<1960:ECAPED>2.0.CO;2} } @article{wright1997, title = {An {Equation} of {State} for {Use} in {Ocean} {Models}: {Eckart}'s {Formula} {Revisited}}, volume = {14}, issn = {0739-0572}, shorttitle = {An {Equation} of {State} for {Use} in {Ocean} {Models}}, url = {https://journals.ametsoc.org/doi/abs/10.1175/1520-0426%281997%29014%3C0735%3AAEOSFU%3E2.0.CO%3B2}, doi = {10.1175/1520-0426(1997)014<0735:AEOSFU>2.0.CO;2}, number = {3}, journal = {Journal of Atmospheric and Oceanic Technology}, author = {Wright, Daniel G.}, month = jun, year = {1997}, pages = {735--740} } @article{griffies2009, title = {Coordinated {Ocean}-ice {Reference} {Experiments} ({COREs})}, volume = {26}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500308001182}, doi = {10.1016/j.ocemod.2008.08.007}, number = {1}, urldate = {2018-06-01}, journal = {Ocean Modelling}, author = {Griffies, Stephen M. and Biastoch, Arne and B\"{o}ning, Claus and Bryan, Frank and Danabasoglu, Gokhan and Chassignet, Eric P. and England, Matthew H. and Gerdes, Rüdiger and Haak, Helmuth and Hallberg, Robert W. and Hazeleger, Wilco and Jungclaus, Johann and Large, William G. and Madec, Gurvan and Pirani, Anna and Samuels, Bonita L. and Scheinert, Markus and Gupta, Alex Sen and Severijns, Camiel A. and Simmons, Harper L. and Treguier, Anne Marie and Winton, Mike and Yeager, Stephen and Yin, Jianjun}, month = jan, year = {2009}, keywords = {Model comparison, Global ocean-ice modelling, Experimental design, World ocean, Circulation stability, Atmospheric forcing, Analysis diagnostics}, pages = {1--46} } @article{danabasoglu2014, title = {North {Atlantic} simulations in {Coordinated} {Ocean}-ice {Reference} {Experiments} phase {II} ({CORE}-{II}). {Part} {I}: {Mean} states}, volume = {73}, issn = {1463-5003}, shorttitle = {North {Atlantic} simulations in {Coordinated} {Ocean}-ice {Reference} {Experiments} phase {II} ({CORE}-{II}). {Part} {I}}, url = {http://www.sciencedirect.com/science/article/pii/S1463500313001868}, doi = {10.1016/j.ocemod.2013.10.005}, urldate = {2018-06-01}, journal = {Ocean Modelling}, author = {Danabasoglu, Gokhan and Yeager, Steve G. and Bailey, David and Behrens, Erik and Bentsen, Mats and Bi, Daohua and Biastoch, Arne and B\"{o}ning, Claus and Bozec, Alexandra and Canuto, Vittorio M. and Cassou, Christophe and Chassignet, Eric and Coward, Andrew C. and Danilov, Sergey and Diansky, Nikolay and Drange, Helge and Farneti, Riccardo and Fernandez, Elodie and Fogli, Pier Giuseppe and Forget, Gael and Fujii, Yosuke and Griffies, Stephen M. and Gusev, Anatoly and Heimbach, Patrick and Howard, Armando and Jung, Thomas and Kelley, Maxwell and Large, William G. and Leboissetier, Anthony and Lu, Jianhua and Madec, Gurvan and Marsland, Simon J. and Masina, Simona and Navarra, Antonio and George Nurser, A. J. and Pirani, Anna and y M\'{e}lia, David Salas and Samuels, Bonita L. and Scheinert, Markus and Sidorenko, Dmitry and Treguier, Anne-Marie and Tsujino, Hiroyuki and Uotila, Petteri and Valcke, Sophie and Voldoire, Aurore and Wang, Qiang}, month = jan, year = {2014}, keywords = {Atlantic meridional overturning circulation, Ocean model comparisons, Experimental design, Atmospheric forcing, North Atlantic simulations, Global ocean-sea-ice modelling}, pages = {76--107} } @article{farneti2015, title = {An assessment of {Antarctic} {Circumpolar} {Current} and {Southern} {Ocean} meridional overturning circulation during 1958-2007 in a suite of interannual {CORE}-{II} simulations}, volume = {93}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500315001183}, doi = {10.1016/j.ocemod.2015.07.009}, urldate = {2018-06-05}, journal = {Ocean Modelling}, author = {Farneti, Riccardo and Downes, Stephanie M. and Griffies, Stephen M. and Marsland, Simon J. and Behrens, Erik and Bentsen, Mats and Bi, Daohua and Biastoch, Arne and B\"{o}ning, Claus and Bozec, Alexandra and Canuto, Vittorio M. and Chassignet, Eric and Danabasoglu, Gokhan and Danilov, Sergey and Diansky, Nikolay and Drange, Helge and Fogli, Pier Giuseppe and Gusev, Anatoly and Hallberg, Robert W. and Howard, Armando and Ilicak, Mehmet and Jung, Thomas and Kelley, Maxwell and Large, William G. and Leboissetier, Anthony and Long, Matthew and Lu, Jianhua and Masina, Simona and Mishra, Akhilesh and Navarra, Antonio and George Nurser, A. J. and Patara, Lavinia and Samuels, Bonita L. and Sidorenko, Dmitry and Tsujino, Hiroyuki and Uotila, Petteri and Wang, Qiang and Yeager, Steve G.}, month = sep, year = {2015}, keywords = {Antarctic Circumpolar Current, Model comparisons, Southern Ocean dynamics, Global ocean-sea ice modeling, Southern Ocean meridional overturning circulation}, pages = {84--120} } @article{griffies2000, title = {Biharmonic {Friction} with a {Smagorinsky}-{Like} {Viscosity} for {Use} in {Large}-{Scale} {Eddy}-{Permitting} {Ocean} {Models}}, volume = {128}, issn = {0027-0644}, url = {https://journals.ametsoc.org/doi/full/10.1175/1520-0493%282000%29128%3C2935%3ABFWASL%3E2.0.CO%3B2}, doi = {10.1175/1520-0493(2000)128<2935:BFWASL>2.0.CO;2}, number = {8}, urldate = {2018-06-10}, journal = {Monthly Weather Review}, author = {Griffies, Stephen M. and Hallberg, Robert W.}, month = aug, year = {2000}, pages = {2935--2946} } @article{manabe1991, title = {Transient {Responses} of a {Coupled} {Ocean}-{Atmosphere} {Model} to {Gradual} {Changes} of {Atmospheric} {CO}2. {Part} {I}. {Annual} {Mean} {Response}}, volume = {4}, issn = {0894-8755}, url = {https://journals.ametsoc.org/doi/abs/10.1175/1520-0442(1991)004%3C0785:TROACO%3E2.0.CO;2}, doi = {10.1175/1520-0442(1991)004<0785:TROACO>2.0.CO;2}, number = {8}, urldate = {2018-07-20}, journal = {Journal of Climate}, author = {Manabe, S. and Stouffer, R. J. and Spelman, M. J. and Bryan, K.}, month = aug, year = {1991}, pages = {785--818} } @article{jansen2015, title = {Parameterization of eddy fluxes based on a mesoscale energy budget}, volume = {92}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500315000967}, doi = {10.1016/j.ocemod.2015.05.007}, urldate = {2018-09-21}, journal = {Ocean Modelling}, author = {Jansen, Malte F. and Adcroft, Alistair J. and Hallberg, Robert and Held, Isaac M.}, month = aug, year = {2015}, keywords = {Rhines scale, Eddy diffusivity, Bottom flow, Eddy kinetic energy, Eddy parameterization, Mesoscale}, pages = {28--41} } @article{stern2016, title = {The effects of {Antarctic} iceberg calving-size distribution in a global climate model}, volume = {121}, copyright = {© 2016. American Geophysical Union. All Rights Reserved.}, issn = {2169-9291}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1002/2016JC011835}, doi = {10.1002/2016JC011835}, language = {en}, number = {8}, urldate = {2018-10-08}, journal = {Journal of Geophysical Research: Oceans}, author = {Stern, A. A. and Adcroft, A. and Sergienko, O.}, month = aug, year = {2016}, keywords = {Antarctica, calving, icebergs, sea ice}, pages = {5773--5788} } @article{wang2015, title = {Representations of the {Nordic} {Seas} overflows and their large scale climate impact in coupled models}, volume = {86}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500314001802}, doi = {10.1016/j.ocemod.2014.12.005}, urldate = {2018-10-08}, journal = {Ocean Modelling}, author = {Wang, He and Legg, Sonya A. and Hallberg, Robert W.}, month = feb, year = {2015}, keywords = {Climate model, AMOC, Overflow}, pages = {76--92} } @article{danabasoglu2010, title = {Climate impacts of parameterized {Nordic} {Sea} overflows}, volume = {115}, copyright = {Copyright 2010 by the American Geophysical Union.}, issn = {2156-2202}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/2010JC006243}, doi = {10.1029/2010JC006243}, language = {en}, number = {C11}, urldate = {2018-10-08}, journal = {Journal of Geophysical Research: Oceans}, author = {Danabasoglu, Gokhan and Large, William G. and Briegleb, Bruce P.}, month = nov, year = {2010}, keywords = {climate impacts of overflows, Nordic Sea overflows, overflow parameterization} } @article{mccarthy2015, title = {Measuring the {Atlantic} {Meridional} {Overturning} {Circulation} at 26°{N}}, volume = {130}, issn = {0079-6611}, url = {http://www.sciencedirect.com/science/article/pii/S0079661114001694}, doi = {https://doi.org/10.1016/j.pocean.2014.10.006}, journal = {Progress in Oceanography}, author = {McCarthy, G. D. and Smeed, D. A. and Johns, W. E. and Frajka-Williams, E. and Moat, B. I. and Rayner, D. and Baringer, M. O. and Meinen, C. S. and Collins, J. and Bryden, H. L.}, year = {2015}, pages = {91 -- 111} } @article{cunningham2007, title = {Temporal {Variability} of the {Atlantic} {Meridional} {Overturning} {Circulation} at 26.5°{N}}, volume = {317}, copyright = {American Association for the Advancement of Science}, issn = {0036-8075, 1095-9203}, url = {http://science.sciencemag.org/content/317/5840/935}, doi = {10.1126/science.1141304}, language = {en}, number = {5840}, urldate = {2018-10-08}, journal = {Science}, author = {Cunningham, Stuart A. and Kanzow, Torsten and Rayner, Darren and Baringer, Molly O. and Johns, William E. and Marotzke, Jochem and Longworth, Hannah R. and Grant, Elizabeth M. and Hirschi, Joël J.-M. and Beal, Lisa M. and Meinen, Christopher S. and Bryden, Harry L.}, month = aug, year = {2007}, pmid = {17702940}, pages = {935--938} } @article{johns2010, title = {Continuous, {Array}-{Based} {Estimates} of {Atlantic} {Ocean} {Heat} {Transport} at 26.5{$^\circ$}{N}}, volume = {24}, issn = {0894-8755}, url = {https://journals.ametsoc.org/doi/10.1175/2010JCLI3997.1}, doi = {10.1175/2010JCLI3997.1}, number = {10}, urldate = {2018-10-08}, journal = {Journal of Climate}, author = {Johns, W. E. and Baringer, M. O. and Beal, L. M. and Cunningham, S. A. and Kanzow, T. and Bryden, H. L. and Hirschi, J. J. M. and Marotzke, J. and Meinen, C. S. and Shaw, B. and Curry, R.}, month = dec, year = {2010}, pages = {2429--2449} } @article{trenberth2001, title = {Estimates of {Meridional} {Atmosphere} and {Ocean} {Heat} {Transports}}, volume = {14}, issn = {0894-8755}, url = {https://journals.ametsoc.org/doi/full/10.1175/1520-0442%282001%29014%3C3433%3AEOMAAO%3E2.0.CO%3B2}, doi = {10.1175/1520-0442(2001)014<3433:EOMAAO>2.0.CO;2}, number = {16}, urldate = {2018-10-08}, journal = {Journal of Climate}, author = {Trenberth, Kevin E. and Caron, Julie M.}, month = aug, year = {2001}, pages = {3433--3443} } @article{egbert2002, title = {Efficient {Inverse} {Modeling} of {Barotropic} {Ocean} {Tides}}, volume = {19}, issn = {0739-0572}, url = {https://journals.ametsoc.org/doi/abs/10.1175/1520-0426%282002%29019%3C0183%3AEIMOBO%3E2.0.CO%3B2}, doi = {10.1175/1520-0426(2002)019<0183:EIMOBO>2.0.CO;2}, number = {2}, urldate = {2018-10-09}, journal = {Journal of Atmospheric and Oceanic Technology}, author = {Egbert, Gary D. and Erofeeva, Svetlana Y.}, month = feb, year = {2002}, pages = {183--204} } @article{downes2015, title = {An assessment of {Southern} {Ocean} water masses and sea ice during 1988-2007 in a suite of interannual {CORE}-{II} simulations}, volume = {94}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500315001420}, doi = {10.1016/j.ocemod.2015.07.022}, urldate = {2018-10-10}, journal = {Ocean Modelling}, author = {Downes, Stephanie M. and Farneti, Riccardo and Uotila, Petteri and Griffies, Stephen M. and Marsland, Simon J. and Bailey, David and Behrens, Erik and Bentsen, Mats and Bi, Daohua and Biastoch, Arne and B\"{o}ning, Claus and Bozec, Alexandra and Canuto, Vittorio M. and Chassignet, Eric and Danabasoglu, Gokhan and Danilov, Sergey and Diansky, Nikolay and Drange, Helge and Fogli, Pier Giuseppe and Gusev, Anatoly and Howard, Armando and Ilicak, Mehmet and Jung, Thomas and Kelley, Maxwell and Large, William G. and Leboissetier, Anthony and Long, Matthew and Lu, Jianhua and Masina, Simona and Mishra, Akhilesh and Navarra, Antonio and George Nurser, A. J. and Patara, Lavinia and Samuels, Bonita L. and Sidorenko, Dmitry and Spence, Paul and Tsujino, Hiroyuki and Wang, Qiang and Yeager, Stephen G.}, month = oct, year = {2015}, keywords = {Southern Ocean, CORE-II experiments, Ocean model intercomparison, Sea ice, Water masses}, pages = {67--94} } @article{morrison2014, title = {Upwelling in the {Southern} {Ocean}}, volume = {68}, issn = {0031-9228}, url = {https://physicstoday.scitation.org/doi/10.1063/PT.3.2654}, doi = {10.1063/PT.3.2654}, number = {1}, urldate = {2018-10-10}, journal = {Physics Today}, author = {Morrison, Adele K. and Fr\"{o}licher, Thomas L. and Sarmiento, Jorge L.}, month = dec, year = {2014}, pages = {27--32} } @article{downes2013, title = {Southern {Ocean} {Circulation} and {Eddy} {Compensation} in {CMIP}5 {Models}}, volume = {26}, issn = {0894-8755}, url = {https://journals.ametsoc.org/doi/10.1175/JCLI-D-12-00504.1}, doi = {10.1175/JCLI-D-12-00504.1}, number = {18}, urldate = {2018-10-10}, journal = {Journal of Climate}, author = {Downes, Stephanie M. and Hogg, Andrew McC.}, month = mar, year = {2013}, pages = {7198--7220} } @article{sallee2013, title = {Assessment of {Southern} {Ocean} mixed-layer depths in {CMIP}5 models: {Historical} bias and forcing response}, volume = {118}, copyright = {©2013. American Geophysical Union. All Rights Reserved.}, issn = {2169-9291}, shorttitle = {Assessment of {Southern} {Ocean} mixed-layer depths in {CMIP}5 models}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1002/jgrc.20157}, doi = {10.1002/jgrc.20157}, language = {en}, number = {4}, urldate = {2018-10-10}, journal = {Journal of Geophysical Research: Oceans}, author = {Sall\'{e}e, J.-B. and Shuckburgh, E. and Bruneau, N. and Meijers, A. J. S. and Bracegirdle, T. J. and Wang, Z.}, month = apr, year = {2013}, keywords = {Southern Ocean, climate model, mixed-layer, ventilation}, pages = {1845--1862} } @article{meredith2011, title = {Sensitivity of the {Overturning} {Circulation} in the {Southern} {Ocean} to {Decadal} {Changes} in {Wind} {Forcing}}, volume = {25}, issn = {0894-8755}, url = {https://journals.ametsoc.org/doi/10.1175/2011JCLI4204.1}, doi = {10.1175/2011JCLI4204.1}, number = {1}, urldate = {2018-10-10}, journal = {Journal of Climate}, author = {Meredith, Michael P. and Naveira Garabato, Alberto C. and Hogg, Andrew McC. and Farneti, Riccardo}, month = jul, year = {2011}, pages = {99--110} } @article{hogg2015, title = {Recent trends in the {Southern} {Ocean} eddy field}, volume = {120}, copyright = {© 2014. American Geophysical Union. All Rights Reserved.}, issn = {2169-9291}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1002/2014JC010470}, doi = {10.1002/2014JC010470}, language = {en}, number = {1}, urldate = {2018-10-10}, journal = {Journal of Geophysical Research: Oceans}, author = {Hogg, Andrew McC and Meredith, Michael P. and Chambers, Don P. and Abrahamsen, E. Povl and Hughes, Chris W. and Morrison, Adele K.}, month = jan, year = {2015}, keywords = {Antarctic Circumpolar Current, Southern Ocean Eddies}, pages = {257--267} } @article{donohue2016, title = {Mean {Antarctic} {Circumpolar} {Current} transport measured in {Drake} {Passage}}, volume = {43}, copyright = {©2016. The Authors.}, issn = {1944-8007}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1002/2016GL070319}, doi = {10.1002/2016GL070319}, language = {en}, number = {22}, urldate = {2018-10-10}, journal = {Geophysical Research Letters}, author = {Donohue, K. A. and Tracey, K. L. and Watts, D. R. and Chidichimo, M. P. and Chereskin, T. K.}, month = nov, year = {2016}, keywords = {Southern Ocean, Antarctic Circumpolar Current, transport}, pages = {11,760--11,767} } @article{heuze2013, title = {Southern {Ocean} bottom water characteristics in {CMIP}5 models}, volume = {40}, copyright = {©2013. American Geophysical Union. All Rights Reserved.}, issn = {1944-8007}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1002/grl.50287}, doi = {10.1002/grl.50287}, language = {en}, number = {7}, urldate = {2018-10-10}, journal = {Geophysical Research Letters}, author = {Heuz\'{e}, C\'{e}line and Heywood, Karen J. and Stevens, David P. and Ridley, Jeff K.}, month = apr, year = {2013}, keywords = {Southern Ocean, Bottom Water, climate models, CMIP5}, pages = {1409--1414} } @article{hallberg2006, title = {The {Role} of {Eddies} in {Determining} the {Structure} and {Response} of the {Wind}-{Driven} {Southern} {Hemisphere} {Overturning}: {Results} from the {Modeling} {Eddies} in the {Southern} {Ocean} ({MESO}) {Project}}, volume = {36}, issn = {0022-3670}, shorttitle = {The {Role} of {Eddies} in {Determining} the {Structure} and {Response} of the {Wind}-{Driven} {Southern} {Hemisphere} {Overturning}}, url = {https://journals.ametsoc.org/doi/10.1175/JPO2980.1}, doi = {10.1175/JPO2980.1}, number = {12}, urldate = {2018-10-10}, journal = {Journal of Physical Oceanography}, author = {Hallberg, Robert and Gnanadesikan, Anand}, month = dec, year = {2006}, pages = {2232--2252} } @article{dufour2015, title = {Role of {Mesoscale} {Eddies} in {Cross}-{Frontal} {Transport} of {Heat} and {Biogeochemical} {Tracers} in the {Southern} {Ocean}}, volume = {45}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/10.1175/JPO-D-14-0240.1}, doi = {10.1175/JPO-D-14-0240.1}, number = {12}, urldate = {2018-10-10}, journal = {Journal of Physical Oceanography}, author = {Dufour, Carolina O. and Griffies, Stephen M. and de Souza, Gregory F. and Frenger, Ivy and Morrison, Adele K. and Palter, Jaime B. and Sarmiento, Jorge L. and Galbraith, Eric D. and Dunne, John P. and Anderson, Whit G. and Slater, Richard D.}, month = sep, year = {2015}, pages = {3057--3081} } @article{penamolino2014, title = {Barotropic and baroclinic contributions to along-stream and across-stream transport in the {Antarctic} {Circumpolar} {Current}}, volume = {119}, copyright = {© 2014. American Geophysical Union. All Rights Reserved.}, issn = {2169-9291}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1002/2014JC010020}, doi = {10.1002/2014JC010020}, language = {en}, number = {11}, urldate = {2018-10-10}, journal = {Journal of Geophysical Research: Oceans}, author = {Pe{\~{n}}a-Molino, B. and Rintoul, S. R. and Mazloff, M. R.}, month = nov, year = {2014}, keywords = {transport, ACC, along-stream, baroclinic, barotropic}, pages = {8011--8028} } @article{killworth1992, title = {An {Equivalent}-{Barotropic} {Mode} in the {Fine} {Resolution} {Antarctic} {Model}}, volume = {22}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/10.1175/1520-0485%281992%29022%3C1379%3AAEBMIT%3E2.0.CO%3B2}, doi = {10.1175/1520-0485(1992)022<1379:AEBMIT>2.0.CO;2}, number = {11}, urldate = {2018-10-10}, journal = {Journal of Physical Oceanography}, author = {Killworth, Peter D.}, month = nov, year = {1992}, pages = {1379--1387} } @article{killworth1999, doi = {10.1175/1520-0485(1999)029<1221:atbblc>2.0.co;2}, year = 1999, publisher = {American Meteorological Society}, volume = {29}, number = {6}, pages = {1221--1238}, author = {P. D. Killworth and N. R. Edwards}, title = {A Turbulent Bottom Boundary Layer Code for Use in Numerical Ocean Models}, journal = {J. Phys. Oceanography} } @article{zilitinkevich1996, doi = {10.1007/bf02430334}, year = 1996, publisher = {Springer Science and Business Media {LLC}}, volume = {81}, number = {3-4}, pages = {325--351}, author = {S. Zilitinkevich and D. V. Mironov}, title = {A multi-limit formulation for the equilibrium depth of a stably stratified boundary layer}, journal = {Boundary-Layer Meteorology} } @article{gent1995, title = {Parameterizing {Eddy}-{Induced} {Tracer} {Transports} in {Ocean} {Circulation} {Models}}, volume = {25}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/10.1175/1520-0485%281995%29025%3C0463%3APEITTI%3E2.0.CO%3B2}, doi = {10.1175/1520-0485(1995)025<0463:PEITTI>2.0.CO;2}, number = {4}, urldate = {2018-10-10}, journal = {Journal of Physical Oceanography}, author = {Gent, Peter R. and Willebrand, Jurgen and McDougall, Trevor J. and McWilliams, James C.}, month = apr, year = {1995}, pages = {463--474} } @article{doos1994, title = {The {Deacon} {Cell} and the {Other} {Meridional} {Cells} of the {Southern} {Ocean}}, volume = {24}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/abs/10.1175/1520-0485%281994%29024%3C0429%3ATDCATO%3E2.0.CO%3B2}, doi = {10.1175/1520-0485(1994)024<0429:TDCATO>2.0.CO;2}, number = {2}, urldate = {2018-10-10}, journal = {Journal of Physical Oceanography}, author = {D\"{o}\"{o}s, Kristofer and Webb, David J.}, month = feb, year = {1994}, pages = {429--442} } @article{karoly1997, title = {Similarities of the deacon cell in the southern ocean and {Ferrel} cells in the atmosphere}, volume = {123}, copyright = {Copyright © 1997 Royal Meteorological Society}, issn = {1477-870X}, url = {https://rmets.onlinelibrary.wiley.com/doi/abs/10.1002/qj.49712353813}, doi = {10.1002/qj.49712353813}, language = {en}, number = {538}, urldate = {2018-10-10}, journal = {Quarterly Journal of the Royal Meteorological Society}, author = {Karoly, D. J. and McIntosh, P. C. and Berrisford, P. and McDougall, T. J. and Hirst, A. C.}, month = jan, year = {1997}, keywords = {Indirect circulations, Oceanic eddies, Transient weather systems}, pages = {519--526} } @article{hirst1998, title = {Meridional {Overturning} and {Dianeutral} {Transport} in a z-{Coordinate} {Ocean} {Model} {Including} {Eddy}-{Induced} {Advection}}, volume = {28}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/full/10.1175/1520-0485(1998)028%3C1205%3AMOADTI%3E2.0.CO%3B2}, doi = {10.1175/1520-0485(1998)028<1205:MOADTI>2.0.CO;2}, number = {6}, urldate = {2018-10-10}, journal = {Journal of Physical Oceanography}, author = {Hirst, Anthony C. and McDougall, Trevor J.}, month = jun, year = {1998}, pages = {1205--1223} } @article{danabasoglu1994, title = {The {Role} of {Mesoscale} {Tracer} {Transports} in the {Global} {Ocean} {Circulation}}, volume = {264}, copyright = {1994 by the American Association for the Advancement of Science}, issn = {0036-8075, 1095-9203}, url = {http://science.sciencemag.org/content/264/5162/1123}, doi = {10.1126/science.264.5162.1123}, language = {en}, number = {5162}, urldate = {2018-10-10}, journal = {Science}, author = {Danabasoglu, Gokhan and McWilliams, James C. and Gent, Peter R.}, month = may, year = {1994}, pmid = {17744896}, pages = {1123--1126} } @article{mcdougall2001, title = {The {Temporal}-{Residual}-{Mean} {Velocity}. {Part} {II}: {Isopycnal} {Interpretation} and the {Tracer} and {Momentum} {Equations}}, volume = {31}, issn = {0022-3670}, shorttitle = {The {Temporal}-{Residual}-{Mean} {Velocity}. {Part} {II}}, url = {https://journals.ametsoc.org/doi/10.1175/1520-0485%282001%29031%3C1222%3ATTRMVP%3E2.0.CO%3B2}, doi = {10.1175/1520-0485(2001)031<1222:TTRMVP>2.0.CO;2}, number = {5}, urldate = {2018-10-10}, journal = {Journal of Physical Oceanography}, author = {McDougall, Trevor J. and McIntosh, Peter C.}, month = may, year = {2001}, pages = {1222--1246} } @article{marshall2003, title = {Residual-{Mean} {Solutions} for the {Antarctic} {Circumpolar} {Current} and {Its} {Associated} {Overturning} {Circulation}}, volume = {33}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/10.1175/1520-0485%282003%29033%3C2341%3ARSFTAC%3E2.0.CO%3B2}, doi = {10.1175/1520-0485(2003)033<2341:RSFTAC>2.0.CO;2}, number = {11}, urldate = {2018-10-10}, journal = {Journal of Physical Oceanography}, author = {Marshall, John and Radko, Timour}, month = nov, year = {2003}, pages = {2341--2354} } @article{montegut2004, title = {Mixed layer depth over the global ocean: {An} examination of profile data and a profile-based climatology}, volume = {109}, copyright = {Copyright 2004 by the American Geophysical Union.}, issn = {2156-2202}, shorttitle = {Mixed layer depth over the global ocean}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/2004JC002378}, doi = {10.1029/2004JC002378}, language = {en}, number = {C12}, urldate = {2018-10-12}, journal = {Journal of Geophysical Research: Oceans}, author = {{de Boyer Mont{\'e}gut}, Cl{\'e}ment and Madec, Gurvan and Fischer, Albert S. and Lazar, Alban and Iudicone, Daniele}, month = dec, year = {2004}, keywords = {mixed layer, density compensation, mixed layer depth criterion} } @article{jackson2008, title = {A {Parameterization} of {Shear}-{Driven} {Turbulence} for {Ocean} {Climate} {Models}}, volume = {38}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/10.1175/2007JPO3779.1}, doi = {10.1175/2007JPO3779.1}, number = {5}, urldate = {2018-10-12}, journal = {Journal of Physical Oceanography}, author = {Jackson, L. and Hallberg, R. and Legg, S.}, month = may, year = {2008}, pages = {1033--1053} } @article{turner1986, doi = {10.1017/s0022112086001222}, year = 1986, publisher = {Cambridge University Press ({CUP})}, volume = {173}, pages = {431--471}, author = {J. S. Turner}, title = {Turbulent entrainment: the development of the entrainment assumption, and its application to geophysical flows}, journal = {J. Fluid Mech.} } @article{reichl2018, title = {A simplified energetics based planetary boundary layer ({ePBL}) approach for ocean climate simulations.}, volume = {132}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500318301069}, doi = {10.1016/j.ocemod.2018.10.004}, urldate = {2018-11-16}, journal = {Ocean Modelling}, author = {Reichl, Brandon G. and Hallberg, Robert}, month = dec, year = {2018}, keywords = {Parameterization, Turbulent boundary layer, Upper ocean, Vertical mixing}, pages = {112--129} } @article{st_laurent2002, title = {Estimating tidally driven mixing in the deep ocean}, volume = {29}, copyright = {Copyright 2002 by the American Geophysical Union.}, issn = {1944-8007}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/2002GL015633}, doi = {10.1029/2002GL015633}, language = {en}, number = {23}, urldate = {2018-11-19}, journal = {Geophysical Research Letters}, author = {St Laurent, L. C. and Simmons, H. L. and Jayne, S. R.}, month = dec, year = {2002}, pages = {21--1--21--4} } @article{melet2012, title = {Sensitivity of the {Ocean} {State} to the {Vertical} {Distribution} of {Internal}-{Tide}-{Driven} {Mixing}}, volume = {43}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/full/10.1175/JPO-D-12-055.1}, doi = {10.1175/JPO-D-12-055.1}, number = {3}, urldate = {2018-11-19}, journal = {Journal of Physical Oceanography}, author = {Melet, Angelique and Hallberg, Robert and Legg, Sonya and Polzin, Kurt}, month = dec, year = {2012}, pages = {602--615} } @article{simmons2004, title = {Tidally driven mixing in a numerical model of the ocean general circulation}, volume = {6}, author = {Simmons, H. L. and S. R. Jayne and L. C. St. Laurent and A. J. Weaver}, year = {2004}, journal = {Ocean Modell.}, pages = {245--263}, doi = {10.1016/S1463-5003(03)00011-8} } @article{polzin2009, title = {An abyssal recipe}, volume = {30}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500309001565}, doi = {10.1016/j.ocemod.2009.07.006}, number = {4}, urldate = {2018-11-19}, journal = {Ocean Modelling}, author = {Polzin, Kurt L.}, month = jan, year = {2009}, keywords = {Benthic boundary layers, Fine structure and microstructure in oceanography, Internal and inertial waves, Ocean bottom processes, Seafloor morphology, geology, and geophysics, Turbulence, diffusion, and mixing processes in oceanography, Upwelling and convergences}, pages = {298--309} } @article{polzin2004, title = {Idealized solutions for the energy balance of the finescale internal wave field}, volume = {34}, journal = {J. Phys. Oceanogr.}, author = {Polzin, Kurt L.}, year = {2004}, pages = {231--246} } @article{white2009, title = {High-order regridding-remapping schemes for continuous isopycnal and generalized coordinates in ocean models}, volume = {228}, issn = {0021-9991}, url = {http://www.sciencedirect.com/science/article/pii/S0021999109004628}, doi = {10.1016/j.jcp.2009.08.016}, number = {23}, urldate = {2018-12-15}, journal = {Journal of Computational Physics}, author = {White, Laurent and Adcroft, Alistair and Hallberg, Robert}, publisher = {Elsevier {BV}}, month = dec, year = {2009}, keywords = {Continuous isopycnal coordinates, Generalized vertical coordinates, Hybrid vertical coordinates, Ocean modeling, Remapping schemes}, pages = {8665--8692} } @article{dunne2012, title = {{GFDL}'s {ESM}2 {Global} {Coupled} {Climate}-{Carbon} {Earth} {System} {Models}. {Part} {I}: {Physical} {Formulation} and {Baseline} {Simulation} {Characteristics}}, volume = {25}, issn = {0894-8755}, shorttitle = {{GFDL}'s {ESM}2 {Global} {Coupled} {Climate}-{Carbon} {Earth} {System} {Models}. {Part} {I}}, url = {https://journals.ametsoc.org/doi/abs/10.1175/jcli-d-11-00560.1}, doi = {10.1175/JCLI-D-11-00560.1}, number = {19}, urldate = {2018-12-15}, journal = {Journal of Climate}, author = {Dunne, John P. and John, Jasmin G. and Adcroft, Alistair J. and Griffies, Stephen M. and Hallberg, Robert W. and Shevliakova, Elena and Stouffer, Ronald J. and Cooke, William and Dunne, Krista A. and Harrison, Matthew J. and Krasting, John P. and Malyshev, Sergey L. and Milly, P. C. D. and Phillipps, Peter J. and Sentman, Lori T. and Samuels, Bonita L. and Spelman, Michael J. and Winton, Michael and Wittenberg, Andrew T. and Zadeh, Niki}, month = apr, year = {2012}, pages = {6646--6665} } @article{bitz1999, title = {An energy-conserving thermodynamic model of sea ice}, volume = {104}, copyright = {Copyright 1999 by the American Geophysical Union.}, issn = {2156-2202}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/1999JC900100}, doi = {10.1029/1999JC900100}, language = {en}, number = {C7}, urldate = {2018-12-20}, journal = {Journal of Geophysical Research: Oceans}, author = {Bitz, C. M. and Lipscomb, William H.}, year = {1999}, pages = {15669--15677} } @inproceedings{briegleb2007, series = {Technical {Note}}, title = {A {Delta}-{Eddington} {Mutiple} {Scattering} {Parameterization} for {Solar} {Radiation} in the {Sea} {Ice} {Component} of the {Community} {Climate} {System} {Model} {\textbar} {OpenSky} {Repository}}, url = {http://opensky.ucar.edu/islandora/object/technotes:484}, doi = {10.5065/D6B27S71}, urldate = {2018-12-20}, booktitle = {{NCAR}/{TN}-472+{STR}}, publisher = {NCAR}, author = {Briegleb, Bruce P. and Light, B.}, year = {2007} } @article{cavalieri1996, title = {Sea {Ice} {Concentrations} from {Nimbus}-7 {SMMR} and {DMSP} {SSM}/{I}-{SSMIS} {Passive} {Microwave} {Data}, {Version} 1}, url = {https://nsidc.org/data/NSIDC-0051/versions/1}, doi = {10.5067/8GQ8LZQVL0VL}, urldate = {2018-12-20}, journal = {National Snow and Ice Data Center}, author = {Cavalieri, D.J. and Parkinson, C.L. and Gloersen, P. and Zwally, H.J.}, year = {1996} } @article{de_lavergne2014, title = {Cessation of deep convection in the open {Southern} {Ocean} under anthropogenic climate change}, volume = {4}, copyright = {2014 Nature Publishing Group}, issn = {1758-6798}, url = {https://www.nature.com/articles/nclimate2132}, doi = {10.1038/nclimate2132}, language = {en}, number = {4}, urldate = {2018-12-20}, journal = {Nature Climate Change}, author = {de Lavergne, Casimir and Palter, Jaime B. and Galbraith, Eric D. and Bernardello, Raffaele and Marinov, Irina}, month = apr, year = {2014}, pages = {278--282} } @article{bitz2001, title = {Simulating the ice-thickness distribution in a coupled climate model}, volume = {106}, copyright = {Copyright 2001 by the American Geophysical Union.}, issn = {2156-2202}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/1999JC000113}, doi = {10.1029/1999JC000113}, language = {en}, number = {C2}, urldate = {2018-12-20}, journal = {Journal of Geophysical Research: Oceans}, author = {Bitz, C. M. and Holland, M. M. and Weaver, A. J. and Eby, M.}, year = {2001}, pages = {2441--2463} } @article{bouillon2009, title = {An elastic-viscous-plastic sea ice model formulated on {Arakawa} {B} and {C} grids}, volume = {27}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500309000043}, doi = {10.1016/j.ocemod.2009.01.004}, number = {3}, urldate = {2018-12-20}, journal = {Ocean Modelling}, author = {Bouillon, Sylvain and Morales Maqueda, Miguel Ángel and Legat, Vincent and Fichefet, Thierry}, month = jan, year = {2009}, keywords = {Sea ice, Coupled sea ice-ocean model, Elastic-viscous-plastic rheology, Model grid}, pages = {174--184} } @article{delworth2006, title = {{GFDL}'s {CM}2 {Global} {Coupled} {Climate} {Models}. {Part} {I}: {Formulation} and {Simulation} {Characteristics}}, volume = {19}, issn = {0894-8755}, shorttitle = {{GFDL}'s {CM}2 {Global} {Coupled} {Climate} {Models}. {Part} {I}}, url = {https://journals.ametsoc.org/doi/abs/10.1175/JCLI3629.1}, doi = {10.1175/JCLI3629.1}, number = {5}, urldate = {2018-12-20}, journal = {Journal of Climate}, author = {Delworth, Thomas L. and Broccoli, Anthony J. and Rosati, Anthony and Stouffer, Ronald J. and Balaji, V. and Beesley, John A. and Cooke, William F. and Dixon, Keith W. and Dunne, John and Dunne, K. A. and Durachta, Jeffrey W. and Findell, Kirsten L. and Ginoux, Paul and Gnanadesikan, Anand and Gordon, C. T. and Griffies, Stephen M. and Gudgel, Rich and Harrison, Matthew J. and Held, Isaac M. and Hemler, Richard S. and Horowitz, Larry W. and Klein, Stephen A. and Knutson, Thomas R. and Kushner, Paul J. and Langenhorst, Amy R. and Lee, Hyun-Chul and Lin, Shian-Jiann and Lu, Jian and Malyshev, Sergey L. and Milly, P. C. D. and Ramaswamy, V. and Russell, Joellen and Schwarzkopf, M. Daniel and Shevliakova, Elena and Sirutis, Joseph J. and Spelman, Michael J. and Stern, William F. and Winton, Michael and Wittenberg, Andrew T. and Wyman, Bruce and Zeng, Fanrong and Zhang, Rong}, month = mar, year = {2006}, pages = {643--674} } @article{dufour2012, title = {Standing and {Transient} {Eddies} in the {Response} of the {Southern} {Ocean} {Meridional} {Overturning} to the {Southern} {Annular} {Mode}}, volume = {25}, issn = {0894-8755}, url = {https://journals.ametsoc.org/doi/abs/10.1175/JCLI-D-11-00309.1}, doi = {10.1175/JCLI-D-11-00309.1}, number = {20}, urldate = {2018-12-20}, journal = {Journal of Climate}, author = {Dufour, C. O. and Le Sommer, J. and Zika, J. D. and Gehlen, M. and Orr, J. C. and Mathiot, P. and Barnier, B.}, month = may, year = {2012}, pages = {6958--6974} } @article{dufour2017, title = {Preconditioning of the {Weddell} {Sea} {Polynya} by the {Ocean} {Mesoscale} and {Dense} {Water} {Overflows}}, volume = {30}, issn = {0894-8755}, url = {https://journals.ametsoc.org/doi/abs/10.1175/JCLI-D-16-0586.1}, doi = {10.1175/JCLI-D-16-0586.1}, number = {19}, urldate = {2018-12-20}, journal = {Journal of Climate}, author = {Dufour, Carolina O. and Morrison, Adele K. and Griffies, Stephen M. and Frenger, Ivy and Zanowski, Hannah and Winton, Michael}, month = jun, year = {2017}, pages = {7719--7737} } @article{farneti2010, title = {The {Role} of {Mesoscale} {Eddies} in the {Rectification} of the {Southern} {Ocean} {Response} to {Climate} {Change}}, volume = {40}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/10.1175/2010JPO4353.1}, doi = {10.1175/2010JPO4353.1}, number = {7}, urldate = {2018-12-20}, journal = {Journal of Physical Oceanography}, author = {Farneti, Riccardo and Delworth, Thomas L. and Rosati, Anthony J. and Griffies, Stephen M. and Zeng, Fanrong}, month = mar, year = {2010}, pages = {1539--1557} } @article{frolicher2014, title = {Dominance of the {Southern} {Ocean} in {Anthropogenic} {Carbon} and {Heat} {Uptake} in {CMIP}5 {Models}}, volume = {28}, issn = {0894-8755}, url = {https://journals.ametsoc.org/doi/10.1175/JCLI-D-14-00117.1}, doi = {10.1175/JCLI-D-14-00117.1}, number = {2}, urldate = {2018-12-20}, journal = {Journal of Climate}, author = {Fr\"{o}licher, Thomas L. and Sarmiento, Jorge L. and Paynter, David J. and Dunne, John P. and Krasting, John P. and Winton, Michael}, month = oct, year = {2014}, pages = {862--886} } @article{hibler1979, title = {A {Dynamic} {Thermodynamic} {Sea} {Ice} {Model}}, volume = {9}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/10.1175/1520-0485%281979%29009%3C0815%3AADTSIM%3E2.0.CO%3B2}, doi = {10.1175/1520-0485(1979)009<0815:ADTSIM>2.0.CO;2}, number = {4}, urldate = {2018-12-20}, journal = {Journal of Physical Oceanography}, author = {Hibler, W. D.}, month = jul, year = {1979}, pages = {815--846} } @article{jenkins2016, title = {Decadal {Ocean} {Forcing} and {Antarctic} {Ice} {Sheet} {Response}: {Lessons} from the {Amundsen} {Sea}}, volume = {29}, shorttitle = {Decadal {Ocean} {Forcing} and {Antarctic} {Ice} {Sheet} {Response}}, url = {https://tos.org/oceanography/article/decadal-ocean-forcing-and-antarctic-ice-sheet-response-lessons-from-the-amu}, doi = {10.5670/oceanog.2016.103}, number = {4}, urldate = {2018-12-20}, journal = {Oceanography}, author = {Jenkins, Adrian and Dutrieux, Pierre and Jacobs, Stan and Steig, Eric and Gudmundsson, Hilmar and Smith, James and Heywood, Karen}, month = dec, year = {2016}, pages = {106--117} } @article{lee2002, title = {Spurious {Diapycnal} {Mixing} of the {Deep} {Waters} in an {Eddy}-{Permitting} {Global} {Ocean} {Model}}, volume = {32}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/10.1175/1520-0485%282002%29032%3C1522%3ASDMOTD%3E2.0.CO%3B2}, doi = {10.1175/1520-0485(2002)032<1522:SDMOTD>2.0.CO;2}, number = {5}, urldate = {2018-12-20}, journal = {Journal of Physical Oceanography}, author = {Lee, Mei-Man and Coward, Andrew C. and Nurser, A. J. George}, month = may, year = {2002}, pages = {1522--1535} } @article{marshall2003-1, title = {Trends in the {Southern} {Annular} {Mode} from {Observations} and {Reanalyses}}, volume = {16}, issn = {0894-8755}, url = {https://journals.ametsoc.org/doi/full/10.1175/1520-0442(2003)016%3C4134:TITSAM%3E2.0.CO;2}, doi = {10.1175/1520-0442(2003)016<4134:TITSAM>2.0.CO;2}, number = {24}, urldate = {2018-12-20}, journal = {Journal of Climate}, author = {Marshall, Gareth J.}, month = dec, year = {2003}, pages = {4134--4143} } @article{mcphaden1998, title = {The {Tropical} {Ocean}-{Global} {Atmosphere} observing system: {A} decade of progress}, volume = {103}, copyright = {Copyright 1998 by the American Geophysical Union.}, issn = {2156-2202}, shorttitle = {The {Tropical} {Ocean}-{Global} {Atmosphere} observing system}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/97JC02906}, doi = {10.1029/97JC02906}, language = {en}, number = {C7}, urldate = {2018-12-20}, journal = {Journal of Geophysical Research: Oceans}, author = {McPhaden, Michael J. and Busalacchi, Antonio J. and Cheney, Robert and Donguy, Jean-Ren\'{e} and Gage, Kenneth S. and Halpern, David and Ji, Ming and Julian, Paul and Meyers, Gary and Mitchum, Gary T. and Niiler, Pearn P. and Picaut, Joel and Reynolds, Richard W. and Smith, Neville and Takeuchi, Kensuke}, year = {1998}, pages = {14169--14240} } @article{morrison2012, title = {On the {Relationship} between {Southern} {Ocean} {Overturning} and {ACC} {Transport}}, volume = {43}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/abs/10.1175/JPO-D-12-057.1}, doi = {10.1175/JPO-D-12-057.1}, number = {1}, urldate = {2018-12-20}, journal = {Journal of Physical Oceanography}, author = {Morrison, Adele K. and Hogg, Andrew McC.}, month = sep, year = {2012}, pages = {140--148} } @article{newsom2016, title = {Southern {Ocean} {Deep} {Circulation} and {Heat} {Uptake} in a {High}-{Resolution} {Climate} {Model}}, volume = {29}, issn = {0894-8755}, url = {https://journals.ametsoc.org/doi/10.1175/JCLI-D-15-0513.1}, doi = {10.1175/JCLI-D-15-0513.1}, number = {7}, urldate = {2018-12-20}, journal = {Journal of Climate}, author = {Newsom, Emily R. and Bitz, Cecilia M. and Bryan, Frank O. and Abernathey, Ryan and Gent, Peter R.}, month = feb, year = {2016}, pages = {2597--2619} } @article{rignot2002, title = {Rapid {Bottom} {Melting} {Widespread} near {Antarctic} {Ice} {Sheet} {Grounding} {Lines}}, volume = {296}, issn = {0036-8075, 1095-9203}, url = {http://science.sciencemag.org/content/296/5575/2020}, doi = {10.1126/science.1070942}, language = {en}, number = {5575}, urldate = {2018-12-20}, journal = {Science}, author = {Rignot, Eric and Jacobs, Stanley S.}, month = jun, year = {2002}, pmid = {12065835}, pages = {2020--2023} } @incollection{rintoul2001, series = {Ocean {Circulation} and {Climate}}, title = {Chapter 4.6 {The} antarctic circumpolar current system}, volume = {77}, url = {http://www.sciencedirect.com/science/article/pii/S0074614201801248}, urldate = {2018-12-20}, booktitle = {International {Geophysics}}, publisher = {Academic Press}, author = {Rintoul, Stephen R. and W. Hughes, Chris and Olbers, Dirk}, editor = {Siedler, Gerold and Church, John and Gould, John}, month = jan, year = {2001}, doi = {10.1016/S0074-6142(01)80124-8}, pages = {271--XXXVI} } @incollection{rintoul2013, series = {Ocean {Circulation} and {Climate}}, title = {Chapter 18 - {Dynamics} of the {Southern} {Ocean} {Circulation}}, volume = {103}, url = {http://www.sciencedirect.com/science/article/pii/B9780123918512000180}, urldate = {2018-12-20}, booktitle = {International {Geophysics}}, publisher = {Academic Press}, author = {Rintoul, Stephen R. and Naveira Garabato, Alberto C.}, editor = {Siedler, Gerold and Griffies, Stephen M. and Gould, John and Church, John A.}, month = jan, year = {2013}, doi = {10.1016/B978-0-12-391851-2.00018-0}, keywords = {Southern Ocean, Eddy, Antarctic Circumpolar Current, Potential vorticity, Overturning circulation, Water mass change}, pages = {471--492} } @article{sabine2004, title = {The {Oceanic} {Sink} for {Anthropogenic} {CO}2}, volume = {305}, copyright = {American Association for the Advancement of Science}, issn = {0036-8075, 1095-9203}, url = {http://science.sciencemag.org/content/305/5682/367}, doi = {10.1126/science.1097403}, language = {en}, number = {5682}, urldate = {2018-12-20}, journal = {Science}, author = {Sabine, Christopher L. and Feely, Richard A. and Gruber, Nicolas and Key, Robert M. and Lee, Kitack and Bullister, John L. and Wanninkhof, Rik and Wong, C. S. and Wallace, Douglas W. R. and Tilbrook, Bronte and Millero, Frank J. and Peng, Tsung-Hung and Kozyr, Alexander and Ono, Tsueno and Rios, Aida F.}, month = jul, year = {2004}, pmid = {15256665}, pages = {367--371} } @article{smeed2018, title = {The {North} {Atlantic} {Ocean} {Is} in a {State} of {Reduced} {Overturning}}, volume = {45}, copyright = {©2018. The Authors.}, issn = {1944-8007}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1002/2017GL076350}, doi = {10.1002/2017GL076350}, language = {en}, number = {3}, urldate = {2018-12-20}, journal = {Geophysical Research Letters}, author = {Smeed, D. A. and Josey, S. A. and Beaulieu, C. and Johns, W. E. and Moat, B. I. and Frajka‐Williams, E. and Rayner, D. and Meinen, C. S. and Baringer, M. O. and Bryden, H. L. and McCarthy, G. D.}, year = {2018}, keywords = {AMOC, Atlantic, circulation, overturning}, pages = {1527--1533} } @article{talley2013, title = {Closure of the {Global} {Overturning} {Circulation} {Through} the {Indian}, {Pacific}, and {Southern} {Oceans}: {Schematics} and {Transports}}, volume = {26}, issn = {10428275}, shorttitle = {Closure of the {Global} {Overturning} {Circulation} {Through} the {Indian}, {Pacific}, and {Southern} {Oceans}}, url = {https://tos.org/oceanography/article/closure-of-the-global-overturning-circulation-through-the-indian-pacific-an}, doi = {10.5670/oceanog.2013.07}, number = {1}, urldate = {2018-12-20}, journal = {Oceanography}, author = {Talley, Lynne}, month = mar, year = {2013}, pages = {80--97} } @article{wang2016, title = {An assessment of the {Arctic} {Ocean} in a suite of interannual {CORE}-{II} simulations. {Part} {I}: {Sea} ice and solid freshwater}, volume = {99}, issn = {1463-5003}, shorttitle = {An assessment of the {Arctic} {Ocean} in a suite of interannual {CORE}-{II} simulations. {Part} {I}}, url = {http://www.sciencedirect.com/science/article/pii/S1463500315002449}, doi = {10.1016/j.ocemod.2015.12.008}, urldate = {2018-12-20}, journal = {Ocean Modelling}, author = {Wang, Qiang and Ilicak, Mehmet and Gerdes, Rüdiger and Drange, Helge and Aksenov, Yevgeny and Bailey, David A. and Bentsen, Mats and Biastoch, Arne and Bozec, Alexandra and B\"{o}ning, Claus and Cassou, Christophe and Chassignet, Eric and Coward, Andrew C. and Curry, Beth and Danabasoglu, Gokhan and Danilov, Sergey and Fernandez, Elodie and Fogli, Pier Giuseppe and Fujii, Yosuke and Griffies, Stephen M. and Iovino, Doroteaciro and Jahn, Alexandra and Jung, Thomas and Large, William G. and Lee, Craig and Lique, Camille and Lu, Jianhua and Masina, Simona and Nurser, A. J. George and Rabe, Benjamin and Roth, Christina and Salas y M\'{e}lia, David and Samuels, Bonita L. and Spence, Paul and Tsujino, Hiroyuki and Valcke, Sophie and Voldoire, Aurore and Wang, Xuezhu and Yeager, Steve G.}, month = mar, year = {2016}, keywords = {Sea ice, Arctic Ocean, CORE II atmospheric forcing, Freshwater}, pages = {110--132} } @article{weatherall2015, title = {A new digital bathymetric model of the world's oceans}, volume = {2}, copyright = {©2015. The Authors.}, issn = {2333-5084}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1002/2015EA000107}, doi = {10.1002/2015EA000107}, language = {en}, number = {8}, urldate = {2018-12-20}, journal = {Earth and Space Science}, author = {Weatherall, Pauline and Marks, K. M. and Jakobsson, Martin and Schmitt, Thierry and Tani, Shin and Arndt, Jan Erik and Rovere, Marzia and Chayes, Dale and Ferrini, Vicki and Wigley, Rochelle}, year = {2015}, keywords = {altimetry, bathymetry, model, multibeam, soundings}, pages = {331--345} } @article{winton2000, title = {A {Reformulated} {Three}-{Layer} {Sea} {Ice} {Model}}, volume = {17}, issn = {0739-0572}, url = {https://journals.ametsoc.org/doi/10.1175/1520-0426%282000%29017%3C0525%3AARTLSI%3E2.0.CO%3B2}, doi = {10.1175/1520-0426(2000)017<0525:ARTLSI>2.0.CO;2}, number = {4}, urldate = {2018-12-20}, journal = {Journal of Atmospheric and Oceanic Technology}, author = {Winton, Michael}, month = apr, year = {2000}, pages = {525--531} } @article{zhang2011, title = {Sensitivity of the {North} {Atlantic} {Ocean} {Circulation} to an abrupt change in the {Nordic} {Sea} overflow in a high resolution global coupled climate model}, volume = {116}, copyright = {Copyright 2011 by the American Geophysical Union}, issn = {2156-2202}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/2011JC007240}, doi = {10.1029/2011JC007240}, language = {en}, number = {C12}, urldate = {2018-12-20}, journal = {Journal of Geophysical Research: Oceans}, author = {Zhang, Rong and Delworth, Thomas L. and Rosati, Anthony and Anderson, Whit G. and Dixon, Keith W. and Lee, Hyun-Chul and Zeng, Fanrong}, year = {2011}, keywords = {AMOC adjustment, Nordic Sea overflow, North Atlantic Ocean Circulation} } @article{straub1993, title = {On the {Transport} and {Angular} {Momentum} {Balance} of {Channel} {Models} of the {Antarctic} {Circumpolar} {Current}}, volume = {23}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/abs/10.1175/1520-0485(1993)023%3C0776:OTTAAM%3E2.0.CO%3B2}, doi = {10.1175/1520-0485(1993)023<0776:OTTAAM>2.0.CO;2}, number = {4}, urldate = {2018-12-20}, journal = {Journal of Physical Oceanography}, author = {Straub, David N.}, month = apr, year = {1993}, pages = {776--782} } @article{legg2006, title = {Comparison of entrainment in overflows simulated by z-coordinate, isopycnal and non-hydrostatic models}, volume = {11}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500304001064}, doi = {10.1016/j.ocemod.2004.11.006}, number = {1}, urldate = {2018-12-20}, journal = {Ocean Modelling}, author = {Legg, Sonya and Hallberg, Robert W. and Girton, James B.}, month = jan, year = {2006}, keywords = {Vertical coordinate, Entrainment, Mixing parameterization, Model resolution, Overflows}, pages = {69--97} } @article{winton1998, title = {Simulation of {Density}-{Driven} {Frictional} {Downslope} {Flow} in {Z}-{Coordinate} {Ocean} {Models}}, volume = {28}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/abs/10.1175/1520-0485%281998%29028%3C2163%3ASODDFD%3E2.0.CO%3B2}, doi = {10.1175/1520-0485(1998)028<2163:SODDFD>2.0.CO;2}, number = {11}, urldate = {2018-12-20}, journal = {Journal of Physical Oceanography}, author = {Winton, Michael and Hallberg, Robert and Gnanadesikan, Anand}, month = nov, year = {1998}, pages = {2163--2174} } @article{ganachaud2003, title = {Large-{Scale} {Ocean} {Heat} and {Freshwater} {Transports} during the {World} {Ocean} {Circulation} {Experiment}}, volume = {16}, issn = {0894-8755}, url = {https://journals.ametsoc.org/doi/10.1175/1520-0442%282003%29016%3C0696%3ALSOHAF%3E2.0.CO%3B2}, doi = {10.1175/1520-0442(2003)016<0696:LSOHAF>2.0.CO;2}, number = {4}, urldate = {2018-12-20}, journal = {Journal of Climate}, author = {Ganachaud, Alexandre and Wunsch, Carl}, month = feb, year = {2003}, pages = {696--705} } @article{harrison2008, title = {Pacific {Subtropical} {Cell} {Response} to {Reduced} {Equatorial} {Dissipation}}, volume = {38}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/abs/10.1175/2008JPO3708.1}, doi = {10.1175/2008JPO3708.1}, number = {9}, urldate = {2018-12-20}, journal = {Journal of Physical Oceanography}, author = {Harrison, M. J. and Hallberg, R. W.}, month = sep, year = {2008}, pages = {1894--1912} } @article{danabasoglu2012, doi = {10.1175/jcli-d-11-00091.1}, year = 2012, publisher = {American Meteorological Society}, volume = {25}, number = {5}, pages = {1361--1389}, author = {G. Danabasoglu and S. C. Bates and B. P. Briegleb and S. R. Jayne and M. Jochum and W. G. Large and S. Peacock and S. G. Yeager}, title = {The {CCSM}4 Ocean Component}, journal = {J. Climate} } @article{henyey1986, title = {Energy and action flow through the internal wave field: {An} eikonal approach}, volume = {91}, copyright = {Copyright 1986 by the American Geophysical Union.}, issn = {2156-2202}, shorttitle = {Energy and action flow through the internal wave field}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/JC091iC07p08487}, doi = {10.1029/JC091iC07p08487}, language = {en}, number = {C7}, urldate = {2018-12-20}, journal = {Journal of Geophysical Research: Oceans}, author = {Henyey, Frank S. and Wright, Jon and Flatt\'{e}, Stanley M.}, year = {1986}, pages = {8487--8495} } @article{bouillon2013, series = {Arctic {Ocean}}, title = {The elastic-viscous-plastic method revisited}, volume = {71}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S146350031300098X}, doi = {10.1016/j.ocemod.2013.05.013}, urldate = {2018-12-20}, journal = {Ocean Modelling}, author = {Bouillon, Sylvain and Fichefet, Thierry and Legat, Vincent and Madec, Gurvan}, month = nov, year = {2013}, keywords = {NEMO, Sea ice, Elastic-viscous-plastic, Viscous-plastic rheology}, pages = {2--12} } @article{thompson2000, title = {Annular {Modes} in the {Extratropical} {Circulation}. {Part} {II}: {Trends}}, volume = {13}, issn = {0894-8755}, shorttitle = {Annular {Modes} in the {Extratropical} {Circulation}. {Part} {II}}, url = {https://journals.ametsoc.org/doi/abs/10.1175/1520-0442(2000)013%3C1018:AMITEC%3E2.0.CO%3B2}, doi = {10.1175/1520-0442(2000)013<1018:AMITEC>2.0.CO;2}, number = {5}, urldate = {2018-12-20}, journal = {Journal of Climate}, author = {Thompson, David W. J. and Wallace, John M. and Hegerl, Gabriele C.}, month = mar, year = {2000}, pages = {1018--1036} } @article{wang2012, title = {Flow {Constraints} on {Pathways} through the {Canadian} {Arctic} {Archipelago}}, volume = {50}, issn = {0705-5900}, url = {https://doi.org/10.1080/07055900.2012.704348}, doi = {10.1080/07055900.2012.704348}, number = {3}, urldate = {2018-12-20}, journal = {Atmosphere-Ocean}, author = {Wang, Qiang and Myers, Paul G. and Hu, Xianmin and Bush, Andrew B. G.}, month = sep, year = {2012}, keywords = {sea ice, numerical model, circulation, Canadian Arctic Archipelago}, pages = {373--385} } @article{marzocchi2015, title = {The {North} {Atlantic} subpolar circulation in an eddy-resolving global ocean model}, volume = {142}, issn = {0924-7963}, url = {http://www.sciencedirect.com/science/article/pii/S0924796314002437}, doi = {10.1016/j.jmarsys.2014.10.007}, urldate = {2019-01-02}, journal = {Journal of Marine Systems}, author = {Marzocchi, Alice and Hirschi, Joël J. -M. and Holliday, N. Penny and Cunningham, Stuart A. and Blaker, Adam T. and Coward, Andrew C.}, month = feb, year = {2015}, keywords = {NEMO, Ocean modelling, North Atlantic, Eddy-resolving, Physical oceanography, Subpolar gyre warming}, pages = {126--143} } @article{petersen2015, title = {Evaluation of the arbitrary {Lagrangian}-{Eulerian} vertical coordinate method in the {MPAS}-{Ocean} model}, volume = {86}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500314001796}, doi = {10.1016/j.ocemod.2014.12.004}, urldate = {2019-01-02}, journal = {Ocean Modelling}, author = {Petersen, Mark R. and Jacobsen, Douglas W. and Ringler, Todd D. and Hecht, Matthew W. and Maltrud, Mathew E.}, month = feb, year = {2015}, keywords = {Arbitrary Lagrangian-Eulerian coordinate method, Diapycnal ocean mixing, Ocean modeling, Unstructured mesh}, pages = {93--113} } @article{megann2018, title = {Estimating the numerical diapycnal mixing in an eddy-permitting ocean model}, volume = {121}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500317301762}, doi = {10.1016/j.ocemod.2017.11.001}, urldate = {2019-01-02}, journal = {Ocean Modelling}, author = {Megann, Alex}, month = jan, year = {2018}, keywords = {Numerical mixing, Global ocean, Ocean model, Watermass transformation}, pages = {19--33} } @article{megann2010, title = {The {Sensitivity} of a {Coupled} {Climate} {Model} to {Its} {Ocean} {Component}}, volume = {23}, issn = {0894-8755}, url = {https://journals.ametsoc.org/doi/full/10.1175/2010JCLI3394.1}, doi = {10.1175/2010JCLI3394.1}, number = {19}, urldate = {2019-01-02}, journal = {Journal of Climate}, author = {Megann, A. P. and New, A. L. and Blaker, A. T. and Sinha, B.}, month = may, year = {2010}, pages = {5126--5150} } @article{griffies2000-1, title = {Spurious {Diapycnal} {Mixing} {Associated} with {Advection} in a z-{Coordinate} {Ocean} {Model}}, volume = {128}, issn = {0027-0644}, url = {https://journals.ametsoc.org/doi/10.1175/1520-0493%282000%29128%3C0538%3ASDMAWA%3E2.0.CO%3B2}, doi = {10.1175/1520-0493(2000)128<0538:SDMAWA>2.0.CO;2}, number = {3}, urldate = {2019-01-02}, journal = {Monthly Weather Review}, author = {Griffies, Stephen M. and Pacanowski, Ronald C. and Hallberg, Robert W.}, month = mar, year = {2000}, pages = {538--564} } @article{griffies2016, title = {{OMIP} contribution to {CMIP}6: experimental and diagnostic protocol for the physical component of the {Ocean} {Model} {Intercomparison} {Project}}, volume = {9}, issn = {1991-959X}, shorttitle = {{OMIP} contribution to {CMIP}6}, url = {https://www.geosci-model-dev.net/9/3231/2016/}, doi = {https://doi.org/10.5194/gmd-9-3231-2016}, language = {English}, number = {9}, urldate = {2019-01-02}, journal = {Geoscientific Model Development}, author = {Griffies, Stephen M. and Danabasoglu, Gokhan and Durack, Paul J. and Adcroft, Alistair J. and Balaji, V. and B\"{o}ning, Claus W. and Chassignet, Eric P. and Curchitser, Enrique and Deshayes, Julie and Drange, Helge and Fox-Kemper, Baylor and Gleckler, Peter J. and Gregory, Jonathan M. and Haak, Helmuth and Hallberg, Robert W. and Heimbach, Patrick and Hewitt, Helene T. and Holland, David M. and Ilyina, Tatiana and Jungclaus, Johann H. and Komuro, Yoshiki and Krasting, John P. and Large, William G. and Marsland, Simon J. and Masina, Simona and McDougall, Trevor J. and Nurser, A. J. George and Orr, James C. and Pirani, Anna and Qiao, Fangli and Stouffer, Ronald J. and Taylor, Karl E. and Treguier, Anne Marie and Tsujino, Hiroyuki and Uotila, Petteri and Valdivieso, Maria and Wang, Qiang and Winton, Michael and Yeager, Stephen G.}, month = sep, year = {2016}, pages = {3231--3296} } @article{delworth2012, title = {Simulated {Climate} and {Climate} {Change} in the {GFDL} {CM}2.5 {High}-{Resolution} {Coupled} {Climate} {Model}}, volume = {25}, issn = {0894-8755}, url = {https://journals.ametsoc.org/doi/abs/10.1175/JCLI-D-11-00316.1}, doi = {10.1175/JCLI-D-11-00316.1}, number = {8}, urldate = {2019-01-02}, journal = {Journal of Climate}, author = {Delworth, Thomas L. and Rosati, Anthony and Anderson, Whit and Adcroft, Alistair J. and Balaji, V. and Benson, Rusty and Dixon, Keith and Griffies, Stephen M. and Lee, Hyun-Chul and Pacanowski, Ronald C. and Vecchi, Gabriel A. and Wittenberg, Andrew T. and Zeng, Fanrong and Zhang, Rong}, month = apr, year = {2012}, pages = {2755--2781} } @article{ilicak2012, title = {Spurious dianeutral mixing and the role of momentum closure}, volume = {45-46}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500311001685}, doi = {10.1016/j.ocemod.2011.10.003}, urldate = {2019-01-02}, journal = {Ocean Modelling}, author = {Ilicak, Mehmet and Adcroft, Alistair J. and Griffies, Stephen M. and Hallberg, Robert W.}, month = jan, year = {2012}, keywords = {Overflows, Ocean models, Cabbeling, Exchange-flow, Momentum transport, Reference potential energy, Spurious dianeutral transport, Tracer advection}, pages = {37--58} } @article{hallberg2009, title = {Reconciling estimates of the free surface height in {Lagrangian} vertical coordinate ocean models with mode-split time stepping}, volume = {29}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500309000298}, doi = {10.1016/j.ocemod.2009.02.008}, number = {1}, urldate = {2019-01-02}, journal = {Ocean Modelling}, author = {Hallberg, Robert and Adcroft, Alistair}, month = jan, year = {2009}, keywords = {Free surface, Lagrangian vertical coordinate, Ocean model, Split time stepping}, pages = {15--26} } @article{adcroft2008, title = {A finite volume discretization of the pressure gradient force using analytic integration}, volume = {22}, publisher = {Elsevier {BV}}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500308000243}, doi = {10.1016/j.ocemod.2008.02.001}, number = {3-4}, urldate = {2019-01-02}, journal = {Ocean Modelling}, author = {Adcroft, Alistair and Hallberg, Robert and Harrison, Matthew}, month = jan, year = {2008}, pages = {106--113} } @article{white2008, title = {A high-order finite volume remapping scheme for nonuniform grids: {The} piecewise quartic method ({PQM})}, volume = {227}, issn = {0021-9991}, publisher = {Elsevier {BV}}, shorttitle = {A high-order finite volume remapping scheme for nonuniform grids}, url = {http://www.sciencedirect.com/science/article/pii/S0021999108002593}, doi = {10.1016/j.jcp.2008.04.026}, number = {15}, urldate = {2019-01-02}, journal = {Journal of Computational Physics}, author = {White, Laurent and Adcroft, Alistair}, month = jul, year = {2008}, keywords = {Compact schemes, Finite volume method, Nonuniform grids, Piecewise parabolic method (PPM), Piecewise quartic method (PQM), Reconstruction, Remapping}, pages = {7394--7422} } @article{adcroft2006, title = {On methods for solving the oceanic equations of motion in generalized vertical coordinates}, volume = {11}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500305000090}, doi = {10.1016/j.ocemod.2004.12.007}, number = {1-2}, urldate = {2019-01-02}, journal = {Ocean Modelling}, author = {Adcroft, Alistair and Hallberg, Robert}, month = jan, year = {2006}, publisher = {Elsevier {BV}}, keywords = {Coordinate transformation, Isopycnal coordinate, Layer model, Non-hydrostatic, Ocean model, Terrain following, Vertical coordinate}, pages = {224--233} } @article{adcroft2004-1, title = {Rescaled height coordinates for accurate representation of free-surface flows in ocean circulation models}, volume = {7}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500303000544}, doi = {10.1016/j.ocemod.2003.09.003}, number = {3}, urldate = {2019-01-02}, journal = {Ocean Modelling}, author = {Adcroft, Alistair and Campin, Jean-Michel}, month = jan, year = {2004}, keywords = {Vertical coordinate, Ocean model, Topography, Free surface, Coordinate transformation, Internal wave generation}, pages = {269--284} } @article{griffies2011, title = {The {GFDL} {CM}3 {Coupled} {Climate} {Model}: {Characteristics} of the {Ocean} and {Sea} {Ice} {Simulations}}, volume = {24}, issn = {0894-8755}, shorttitle = {The {GFDL} {CM}3 {Coupled} {Climate} {Model}}, url = {https://journals.ametsoc.org/doi/full/10.1175/2011JCLI3964.1}, doi = {10.1175/2011JCLI3964.1}, number = {13}, urldate = {2019-01-02}, journal = {Journal of Climate}, author = {Griffies, Stephen M. and Winton, Michael and Donner, Leo J. and Horowitz, Larry W. and Downes, Stephanie M. and Farneti, Riccardo and Gnanadesikan, Anand and Hurlin, William J. and Lee, Hyun-Chul and Liang, Zhi and Palter, Jaime B. and Samuels, Bonita L. and Wittenberg, Andrew T. and Wyman, Bruce L. and Yin, Jianjun and Zadeh, Niki}, month = apr, year = {2011}, pages = {3520--3544} } @article{delworth2002, title = {Review of simulations of climate variability and change with the {GFDL} {R}30 coupled climate model}, volume = {19}, issn = {1432-0894}, url = {https://doi.org/10.1007/s00382-002-0249-5}, doi = {10.1007/s00382-002-0249-5}, language = {en}, number = {7}, urldate = {2019-01-16}, journal = {Climate Dynamics}, author = {Delworth, T. and Stouffer, R. and Dixon, K. and Spelman, M. and Knutson, T. and Broccoli, A. and Kushner, P. and Wetherald, R.}, month = sep, year = {2002}, keywords = {Climate Variability, Control Integration, Couple Model, Solar Irradiance, Sulfate Aerosol}, pages = {555--574} } @article{rosati1997, title = {The {Impact} of {Ocean} {Initial} {Conditions} on {ENSO} {Forecasting} with a {Coupled} {Model}}, volume = {125}, issn = {0027-0644}, url = {https://journals.ametsoc.org/doi/abs/10.1175/1520-0493(1997)125%3C0754%3ATIOOIC%3E2.0.CO%3B2}, doi = {10.1175/1520-0493(1997)125<0754:TIOOIC>2.0.CO;2}, number = {5}, urldate = {2019-01-16}, journal = {Monthly Weather Review}, author = {Rosati, A. and Miyakoda, K. and Gudgel, R.}, month = may, year = {1997}, pages = {754--772} } @article{large1994, title = {Oceanic vertical mixing: {A} review and a model with a nonlocal boundary layer parameterization}, volume = {32}, copyright = {Copyright 1994 by the American Geophysical Union.}, issn = {1944-9208}, shorttitle = {Oceanic vertical mixing}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/94RG01872}, doi = {10.1029/94RG01872}, language = {en}, number = {4}, urldate = {2019-01-16}, journal = {Reviews of Geophysics}, author = {Large, W. G. and McWilliams, J. C. and Doney, S. C.}, year = {1994}, pages = {363--403} } @article{pacanowski1981, doi = {10.1175/1520-0485(1981)011<1443:povmin>2.0.co;2}, year = 1981, publisher = {American Meteorological Society}, volume = {11}, number = {11}, pages = {1443--1451}, author = {R. C. Pacanowski and S. G. H. Philander}, title = {Parameterization of Vertical Mixing in Numerical Models of Tropical Oceans}, journal = {J. Phys. Oceanography} } @article{van_roekel2018, title = {The {KPP} {Boundary} {Layer} {Scheme} for the {Ocean}: {Revisiting} {Its} {Formulation} and {Benchmarking} {One}-{Dimensional} {Simulations} {Relative} to {LES}}, volume = {10}, copyright = {©2018. The Authors.}, issn = {1942-2466}, shorttitle = {The {KPP} {Boundary} {Layer} {Scheme} for the {Ocean}}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/2018MS001336}, doi = {10.1029/2018MS001336}, language = {en}, number = {11}, urldate = {2019-02-09}, journal = {Journal of Advances in Modeling Earth Systems}, author = {Van Roekel, Luke and Adcroft, Alistair J. and Danabasoglu, Gokhan and Griffies, Stephen M. and Kauffman, Brian and Large, William and Levy, Michael and Reichl, Brandon G. and Ringler, Todd and Schmidt, Martin}, year = {2018}, keywords = {ocean model, parameterization, KPP, ocean surface boundary layer, vertical mixing}, pages = {2647--2685} } @article{stewart2017, title = {Vertical resolution of baroclinic modes in global ocean models}, volume = {113}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500317300434}, doi = {10.1016/j.ocemod.2017.03.012}, urldate = {2019-02-22}, journal = {Ocean Modelling}, author = {Stewart, K. D. and Hogg, A. McC. and Griffies, S. M. and Heerdegen, A. P. and Ward, M. L. and Spence, P. and England, M. H.}, month = may, year = {2017}, keywords = {Baroclinic modal structure, High-resolution global ocean model, Vertical resolution}, pages = {50--65} } @article{hallberg2013, title = {Using a resolution function to regulate parameterizations of oceanic mesoscale eddy effects}, volume = {72}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500313001601}, doi = {10.1016/j.ocemod.2013.08.007}, urldate = {2019-02-26}, journal = {Ocean Modelling}, author = {Hallberg, Robert}, month = dec, year = {2013}, keywords = {Eddy parameterization, Eddy permitting, Ocean model, Resolution function}, pages = {92--103} } @article{wittenberg2018, title = {Improved {Simulations} of {Tropical} {Pacific} {Annual}-{Mean} {Climate} in the {GFDL} {FLOR} and {HiFLOR} {Coupled} {GCMs}}, volume = {10}, issn = {1942-2466}, url = {https://agupubs.onlinelibrary.wiley.com/doi/full/10.1029/2018MS001372}, doi = {10.1029/2018MS001372}, number = {12}, urldate = {2019-02-27}, journal = {Journal of Advances in Modeling Earth Systems}, author = {Wittenberg, Andrew T. and Vecchi, Gabriel A. and Delworth, Thomas L. and Rosati, Anthony and Anderson, Whit G. and Cooke, William F. and Underwood, Seth and Zeng, Fanrong and Griffies, Stephen M. and Ray, Sulagna}, month = dec, year = {2018}, keywords = {air-sea interactions, coupled models of the climate system, El Niño Southern Oscillation (ENSO), tropical Pacific climate, upper ocean and mixed layer processes}, pages = {3176--3220} } @article{large2009, title = {The global climatology of an interannually varying air-sea flux data set}, volume = {33}, issn = {1432-0894}, url = {https://doi.org/10.1007/s00382-008-0441-3}, doi = {10.1007/s00382-008-0441-3}, language = {en}, number = {2}, urldate = {2019-03-07}, journal = {Climate Dynamics}, author = {Large, W. G. and Yeager, S. G.}, month = aug, year = {2009}, keywords = {Freshwater Flux, Global Precipitation Climatology Project, Heat Flux, Latent Heat Flux, Western Boundary Current}, pages = {341--364} } @article{griffies2005, title = {Formulation of an ocean model for global climate simulations}, volume = {1}, issn = {1812-0784}, url = {https://www.ocean-sci.net/1/45/2005/}, doi = {https://doi.org/10.5194/os-1-45-2005}, language = {English}, number = {1}, urldate = {2019-03-07}, journal = {Ocean Science}, author = {Griffies, S. M. and Gnanadesikan, A. and Dixon, K. W. and Dunne, J. P. and Gerdes, R. and Harrison, M. J. and Rosati, A. and Russell, J. L. and Samuels, B. L. and Spelman, M. J. and Winton, M. and Zhang, R.}, month = sep, year = {2005}, pages = {45--79} } @article{gnanadesikan2006, title = {{GFDL}'s {CM}2 {Global} {Coupled} {Climate} {Models}. {Part} {II}: {The} {Baseline} {Ocean} {Simulation}}, volume = {19}, issn = {0894-8755}, shorttitle = {{GFDL}'s {CM}2 {Global} {Coupled} {Climate} {Models}. {Part} {II}}, url = {https://journals.ametsoc.org/doi/10.1175/JCLI3630.1}, doi = {10.1175/JCLI3630.1}, number = {5}, urldate = {2019-03-07}, journal = {Journal of Climate}, author = {Gnanadesikan, Anand and Dixon, Keith W. and Griffies, Stephen M. and Balaji, V. and Barreiro, Marcelo and Beesley, J. Anthony and Cooke, William F. and Delworth, Thomas L. and Gerdes, Rudiger and Harrison, Matthew J. and Held, Isaac M. and Hurlin, William J. and Lee, Hyun-Chul and Liang, Zhi and Nong, Giang and Pacanowski, Ronald C. and Rosati, Anthony and Russell, Joellen and Samuels, Bonita L. and Song, Qian and Spelman, Michael J. and Stouffer, Ronald J. and Sweeney, Colm O. and Vecchi, Gabriel and Winton, Michael and Wittenberg, Andrew T. and Zeng, Fanrong and Zhang, Rong and Dunne, John P.}, month = mar, year = {2006}, pages = {675--697} } @article{stacey1995, title = {A {Numerical} {Model} of the {Circulation} in {Knight} {Inlet}, {British} {Columbia}, {Canada}}, volume = {25}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/abs/10.1175/1520-0485%281995%29025%3C1037%3AANMOTC%3E2.0.CO%3B2}, doi = {10.1175/1520-0485(1995)025<1037:ANMOTC>2.0.CO;2}, number = {6}, urldate = {2019-03-07}, journal = {Journal of Physical Oceanography}, author = {Stacey, Michael W. and Pond, Stephen and Nowak, Zenon P.}, month = jun, year = {1995}, pages = {1037--1062} } @article{schumann1995, title = {Turbulent {Mixing} in {Stably} {Stratified} {Shear} {Flows}}, volume = {34}, issn = {0894-8763}, url = {https://journals.ametsoc.org/doi/abs/10.1175/1520-0450-34.1.33}, doi = {10.1175/1520-0450-34.1.33}, number = {1}, urldate = {2019-03-07}, journal = {Journal of Applied Meteorology}, author = {Schumann, U. and Gerz, T.}, month = jan, year = {1995}, pages = {33--48} } @article{rodi1987, title = {Examples of calculation methods for flow and mixing in stratified fluids}, volume = {92}, copyright = {Copyright 1987 by the American Geophysical Union.}, issn = {2156-2202}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/JC092iC05p05305}, doi = {10.1029/JC092iC05p05305}, language = {en}, number = {C5}, urldate = {2019-03-07}, journal = {Journal of Geophysical Research: Oceans}, author = {Rodi, Wolfgang}, year = {1987}, pages = {5305--5328} } @article{bernie2008, title = {Impact of resolving the diurnal cycle in an ocean-atmosphere {GCM}. {Part} 2: {A} diurnally coupled {CGCM}}, volume = {31}, issn = {1432-0894}, shorttitle = {Impact of resolving the diurnal cycle in an ocean-atmosphere {GCM}. {Part} 2}, url = {https://doi.org/10.1007/s00382-008-0429-z}, doi = {10.1007/s00382-008-0429-z}, language = {en}, number = {7}, urldate = {2019-03-07}, journal = {Climate Dynamics}, author = {Bernie, D. J. and Guilyardi, E. and Madec, G. and Slingo, J. M. and Woolnough, S. J. and Cole, J.}, month = dec, year = {2008}, keywords = {Cold Tongue, Diurnal Cycle, Inter Tropical Convergence Zone, Warm Pool, Western Pacific Warm Pool}, pages = {909--925} } @article{bernie2007, title = {Impact of resolving the diurnal cycle in an ocean-atmosphere {GCM}. {Part} 1: a diurnally forced {OGCM}}, volume = {29}, issn = {1432-0894}, shorttitle = {Impact of resolving the diurnal cycle in an ocean-atmosphere {GCM}. {Part} 1}, url = {https://doi.org/10.1007/s00382-007-0249-6}, doi = {10.1007/s00382-007-0249-6}, language = {en}, number = {6}, urldate = {2019-03-07}, journal = {Climate Dynamics}, author = {Bernie, D. J. and Guilyardi, E. and Madec, G. and Slingo, J. M. and Woolnough, S. J.}, month = nov, year = {2007}, keywords = {Diurnal Cycle, Intraseasonal Variability, Ocean General Circulation Model, Tropical Rainfall Measure Mission, Turbulent Boundary Layer}, pages = {575--590} } @article{eyring2016, title = {Overview of the {Coupled} {Model} {Intercomparison} {Project} {Phase} 6 ({CMIP}6) experimental design and organization}, volume = {9}, issn = {1991-959X}, url = {https://www.geosci-model-dev.net/9/1937/2016/}, doi = {https://doi.org/10.5194/gmd-9-1937-2016}, language = {English}, number = {5}, urldate = {2019-03-07}, journal = {Geoscientific Model Development}, author = {Eyring, Veronika and Bony, Sandrine and Meehl, Gerald A. and Senior, Catherine A. and Stevens, Bjorn and Stouffer, Ronald J. and Taylor, Karl E.}, month = may, year = {2016}, pages = {1937--1958} } @article{solomon1971, title = {On the {Representation} of {Isentropic} {Mixing} in {Ocean} {Circulation} {Models}}, volume = {1}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/abs/10.1175/1520-0485(1971)001%3C0233%3AOTROIM%3E2.0.CO%3B2}, doi = {10.1175/1520-0485(1971)001<0233:OTROIM>2.0.CO;2}, number = {3}, urldate = {2019-03-07}, journal = {Journal of Physical Oceanography}, author = {Solomon, Harold}, month = jul, year = {1971}, pages = {233--234} } @article{holloway1997, title = {Eddy {Transport} of {Thickness} and {Momentum} in {Layer} and {Level} {Models}}, volume = {27}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/abs/10.1175/1520-0485%281997%29027%3C1153%3AETOTAM%3E2.0.CO%3B2}, doi = {10.1175/1520-0485(1997)027<1153:ETOTAM>2.0.CO;2}, number = {6}, urldate = {2019-03-07}, journal = {Journal of Physical Oceanography}, author = {Holloway, Greg}, month = jun, year = {1997}, pages = {1153--1157} } @article{thiele1990, title = {Tracer dating and ocean ventilation}, volume = {95}, copyright = {Copyright 1990 by the American Geophysical Union.}, issn = {2156-2202}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/JC095iC06p09377}, doi = {10.1029/JC095iC06p09377}, language = {en}, number = {C6}, urldate = {2019-03-07}, journal = {Journal of Geophysical Research: Oceans}, author = {Thiele, G. and Sarmiento, J. L.}, year = {1990}, pages = {9377--9391} } @article{griffies2000-2, title = {Developments in ocean climate modelling}, volume = {2}, issn = {1463-5003}, url = {http://www.sciencedirect.com/science/article/pii/S1463500300000147}, doi = {10.1016/S1463-5003(00)00014-7}, number = {3}, urldate = {2019-03-07}, journal = {Ocean Modelling}, author = {Griffies, Stephen M. and B\"{o}ning, Claus and Bryan, Frank O. and Chassignet, Eric P. and Gerdes, Rüdiger and Hasumi, Hiroyasu and Hirst, Anthony and Treguier, Anne-Marie and Webb, David}, month = jan, year = {2000}, pages = {123--192} } @techreport{locarnini2006, title = {World {Ocean} {Atlas} 2005, {Volume} 1: {Temperature}}, number = {61}, institution = {U.S. Government Printing Office, Washington, D.C.}, author = {Locarnini, R.A. and Mishonov, A.V. and Antonov, J.I. and Boyer, T.P. and Garcia, H.E.}, editor = {Levitus, S.}, year = {2006}, pages = {182 pp} } @techreport{antonov2006, title = {World {Ocean} {Atlas} 2005, {Volume} 1: {Salinity}}, number = {61}, institution = {U.S. Government Printing Office, Washington, D.C.}, author = {Antonov, J.I. and Locarnini, R.A. and Boyer, T.P. and Mishonov, A.V. and Garcia, H.E.}, editor = {Levitus, S.}, year = {2006}, pages = {182 pp} } @article{girton2003, title = {Descent and {Modification} of the {Overflow} {Plume} in the {Denmark} {Strait}}, volume = {33}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/10.1175/1520-0485%282003%29033%3C1351%3ADAMOTO%3E2.0.CO%3B2}, doi = {10.1175/1520-0485(2003)033<1351:DAMOTO>2.0.CO;2}, number = {7}, urldate = {2019-03-19}, journal = {Journal of Physical Oceanography}, author = {Girton, James B. and Sanford, Thomas B.}, month = jul, year = {2003}, pages = {1351--1364} } @article{mauritzen2005, title = {Circulation and mixing in the {Faroese} {Channels}}, volume = {52}, issn = {0967-0637}, url = {http://www.sciencedirect.com/science/article/pii/S0967063705000294}, doi = {10.1016/j.dsr.2004.11.018}, number = {6}, urldate = {2019-03-19}, journal = {Deep Sea Research Part I: Oceanographic Research Papers}, author = {Mauritzen, C. and Price, J. and Sanford, T. and Torres, D.}, month = jun, year = {2005}, keywords = {Dense overflows, Entrainment, Faroese Channels, Mixing, Thorpe scale}, pages = {883--913} } @article{baringer1997, title = {Mixing and {Spreading} of the {Mediterranean} {Outflow}}, volume = {27}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/full/10.1175/1520-0485%281997%29027%3C1654%3AMASOTM%3E2.0.CO%3B2}, doi = {10.1175/1520-0485(1997)027<1654:MASOTM>2.0.CO;2}, number = {8}, urldate = {2019-03-19}, journal = {Journal of Physical Oceanography}, author = {Baringer, Molly O’Neil and Price, James F.}, month = aug, year = {1997}, pages = {1654--1677} } @article{legg2009, title = {Improving {Oceanic} {Overflow} {Representation} in {Climate} {Models}: {The} {Gravity} {Current} {Entrainment} {Climate} {Process} {Team}}, volume = {90}, issn = {0003-0007}, shorttitle = {Improving {Oceanic} {Overflow} {Representation} in {Climate} {Models}}, url = {https://journals.ametsoc.org/doi/abs/10.1175/2008BAMS2667.1}, doi = {10.1175/2008BAMS2667.1}, number = {5}, urldate = {2019-03-19}, journal = {Bulletin of the American Meteorological Society}, author = {Legg, Sonya and Briegleb, Bruce and Chang, Yeon and Chassignet, Eric P. and Danabasoglu, Gokhan and Ezer, Tal and Gordon, Arnold L. and Griffies, Stephen and Hallberg, Robert and Jackson, Laura and Large, William and \"{O}zg\"{o}kmen, Tamay M. and Peters, Hartmut and Price, Jim and Riemenschneider, Ulrike and Wu, Wanli and Xu, Xiaobiao and Yang, Jiayan}, month = may, year = {2009}, pages = {657--670} } @book{vallis2006, title = {Atmospheric and {Oceanic} {Fluid} {Dynamics}: {Fundamentals} and {Large}-scale {Circulation}}, isbn = {978-0-521-84969-2}, shorttitle = {Atmospheric and {Oceanic} {Fluid} {Dynamics}}, language = {en}, publisher = {Cambridge University Press}, author = {Vallis, Geoffrey K.}, month = nov, year = {2006}, note = {Google-Books-ID: dI7EngEACAAJ}, keywords = {Science / Earth Sciences / Meteorology \& Climatology, Science / Earth Sciences / Oceanography, Science / Mechanics / Fluids} } @article{hallberg1997, title = {Localized {Coupling} between {Surface} and {Bottom}-{Intensified} {Flow} over {Topography}}, volume = {27}, issn = {0022-3670}, url = {http://journals.ametsoc.org/doi/abs/10.1175/1520-0485(1997)027%3C0977%3ALCBSAB%3E2.0.CO%3B2}, doi = {10.1175/1520-0485(1997)027<0977:LCBSAB>2.0.CO;2}, number = {6}, urldate = {2016-09-21}, journal = {Journal of Physical Oceanography}, author = {Hallberg, Robert}, month = jun, year = {1997}, pages = {977--998} } @article{jakobsson2012, title = {The {International} {Bathymetric} {Chart} of the {Arctic} {Ocean} ({IBCAO}) {Version} 3.0}, volume = {39}, copyright = {©2012. American Geophysical Union. All Rights Reserved.}, issn = {1944-8007}, url = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/2012GL052219}, doi = {10.1029/2012GL052219}, language = {en}, number = {12}, urldate = {2019-03-26}, journal = {Geophysical Research Letters}, author = {Jakobsson, Martin and Mayer, Larry and Coakley, Bernard and Dowdeswell, Julian A. and Forbes, Steve and Fridman, Boris and Hodnesdal, Hanne and Noormets, Riko and Pedersen, Richard and Rebesco, Michele and Schenke, Hans Werner and Zarayskaya, Yulia and Accettella, Daniela and Armstrong, Andrew and Anderson, Robert M. and Bienhoff, Paul and Camerlenghi, Angelo and Church, Ian and Edwards, Margo and Gardner, James V. and Hall, John K. and Hell, Benjamin and Hestvik, Ole and Kristoffersen, Yngve and Marcussen, Christian and Mohammad, Rezwan and Mosher, David and Nghiem, Son V. and Pedrosa, Maria Teresa and Travaglini, Paola G. and Weatherall, Pauline}, year = {2012}, keywords = {Arctic Ocean, bathymetry, mapping, seafloor} } @article{dukowicz2000, title = {Incremental {Remapping} as a {Transport}/{Advection} {Algorithm}}, volume = {160}, issn = {0021-9991}, url = {http://www.sciencedirect.com/science/article/pii/S0021999100964659}, doi = {10.1006/jcph.2000.6465}, number = {1}, urldate = {2019-03-27}, journal = {Journal of Computational Physics}, author = {Dukowicz, John K. and Baumgardner, John R.}, month = may, year = {2000}, pages = {318--335} } @article{evans2017, title = {Recent {Wind}-{Driven} {Variability} in {Atlantic} {Water} {Mass} {Distribution} and {Meridional} {Overturning} {Circulation}}, volume = {47}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/10.1175/JPO-D-16-0089.1}, doi = {10.1175/JPO-D-16-0089.1}, number = {3}, urldate = {2019-03-29}, journal = {Journal of Physical Oceanography}, author = {Evans, Dafydd Gwyn and Toole, John and Forget, Gael and Zika, Jan D. and Naveira Garabato, Alberto C. and Nurser, A. J. George and Yu, Lisan}, month = jan, year = {2017}, pages = {633--647} } @article{lorenz1960, title = {Energy and {Numerical} {Weather} {Prediction}}, volume = {12}, copyright = {1960 Blackwell Munksgaard}, issn = {2153-3490}, url = {https://onlinelibrary.wiley.com/doi/abs/10.1111/j.2153-3490.1960.tb01323.x}, doi = {10.1111/j.2153-3490.1960.tb01323.x}, language = {en}, number = {4}, urldate = {2019-07-25}, journal = {Tellus}, author = {Lorenz, Edward N.}, year = {1960}, pages = {364--373} } @article{sadourny1975, title = {The {Dynamics} of {Finite}-{Difference} {Models} of the {Shallow}-{Water} {Equations}}, volume = {32}, issn = {0022-4928}, url = {https://journals.ametsoc.org/doi/abs/10.1175/1520-0469%281975%29032%3C0680%3ATDOFDM%3E2.0.CO%3B2}, doi = {10.1175/1520-0469(1975)032<0680:TDOFDM>2.0.CO;2}, number = {4}, urldate = {2019-07-28}, journal = {Journal of the Atmospheric Sciences}, author = {Sadourny, Robert}, month = apr, year = {1975}, pages = {680--689} } @article{colella1984, title = {The {Piecewise} {Parabolic} {Method} ({PPM}) for gas-dynamical simulations}, volume = {54}, issn = {0021-9991}, url = {https://www.sciencedirect.com/science/article/pii/0021999184901438}, doi = {10.1016/0021-9991(84)90143-8}, number = {1}, urldate = {2017-02-09}, journal = {Journal of Computational Physics}, author = {Colella, Phillip and Woodward, Paul R}, month = apr, year = {1984}, pages = {174--201} } @article{carpenter1990, title = {Application of the Piecewise Parabolic Method (PPM) to Meteorological Modeling}, author = {Carpenter, Richard L., Jr. and Kelvin K. Droegemeier and Paul R. Woodward and Carl E. Hane}, journal = {Monthly Weather Review}, year = {1990}, volume = {118}, pages = {586-–612}, doi = {https://doi.org/10.1175/1520-0493(1990)118<0586:AOTPPM>2.0.CO;2} } @article{kasahara1974-1, title = {Various {Vertical} {Coordinate} {Systems} {Used} for {Numerical} {Weather} {Prediction}}, volume = {102}, issn = {0027-0644}, url = {https://journals.ametsoc.org/doi/abs/10.1175/1520-0493%281974%29102%3C0509%3AVVCSUF%3E2.0.CO%3B2}, doi = {10.1175/1520-0493(1974)102<0509:VVCSUF>2.0.CO;2}, number = {7}, journal = {Monthly Weather Review}, author = {Kasahara, Akira}, month = jul, year = {1974}, pages = {509--522} } @article{balaji2017, title = {{CPMIP}: measurements of real computational performance of {Earth} system models in {CMIP}6}, author = {Balaji, V. and Maisonnave, E. and Zadeh, N. and Lawrence, B. N. and Biercamp, J. and Fladrich, U. and Aloisio, G. and Benson, R. and Caubel, A. and Durachta, J. and Foujols, M.-A. and Lister, G. and Mocavero, S. and Underwood, S. and Wright, G.}, volume = {10}, issn = {1991-959X}, shorttitle = {{CPMIP}}, url = {https://www.geosci-model-dev.net/10/19/2017/}, doi = {10.5194/gmd-10-19-2017}, month = jan, year = {2017}, pages = {19--34} } @incollection{balaji2012, address = {Berlin, Heidelberg}, series = {{SpringerBriefs} in {Earth} {System} {Sciences}}, title = {The {Flexible} {Modeling} {System}}, isbn = {9783642233609}, url = {https://doi.org/10.1007/978-3-642-23360-9_5}, booktitle = {Earth {System} {Modelling} - {Volume} 3: {Coupling} {Software} and {Strategies}}, publisher = {Springer Berlin Heidelberg}, author = {Balaji, V.}, editor = {Valcke, Sophie and Redler, René and Budich, Reinhard}, year = {2012}, doi = {10.1007/978-3-642-23360-9_5}, pages = {33--41} } @article{boccaletti2007, title = {Mixed {Layer} {Instabilities} and {Restratification}}, volume = {37}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/full/10.1175/JPO3101.1}, doi = {10.1175/JPO3101.1}, number = {9}, journal = {Journal of Physical Oceanography}, author = {Boccaletti, Giulio and Ferrari, Raffaele and Fox-Kemper, Baylor}, month = sep, year = {2007}, pages = {2228--2250} } @article{starr1945, title = {A quasi-lagrangian system of hydrodynamical equations}, volume = {2}, issn = {0095-9634}, url = {https://journals.ametsoc.org/doi/abs/10.1175/1520-0469%281945%29002%3C0227%3AAQLSOH%3E2.0.CO%3B2}, doi = {10.1175/1520-0469(1945)002<0227:AQLSOH>2.0.CO;2}, number = {4}, journal = {Journal of Meteorology}, author = {Starr, Victor P.}, month = dec, year = {1945}, pages = {227--237} } @article{megann2001, title = {The {Effects} of {Resolution} and {Viscosity} in an {Isopycnic}-{Coordinate} {Model} of the {Equatorial} {Pacific}}, volume = {31}, issn = {0022-3670}, url = {https://journals.ametsoc.org/doi/full/10.1175/1520-0485%282001%29031%3C1993%3ATEORAV%3E2.0.CO%3B2}, doi = {10.1175/1520-0485(2001)031<1993:TEORAV>2.0.CO;2}, number = {8}, journal = {Journal of Physical Oceanography}, author = {Megann, Alex and New, Adrian}, month = aug, year = {2001}, pages = {1993--2018} } @article{hallberg2000, title = {Time integration of diapycnal diffusion and Richardson number–dependent mixing in isopycnal coordinate ocean models}, author = {Hallberg, Robert}, year = {2000}, journal = {Monthly Weather Review}, volume = {128}, pages = {1402--1419} } @article{umlauf2005, doi = {10.1016/j.csr.2004.08.004}, year = 2005, publisher = {Elsevier {BV}}, volume = {25}, number = {7-8}, pages = {795--827}, author = {L. Umlauf and H. Burchard}, title = {Second-order turbulence closure models for geophysical boundary layers. A review of recent work}, journal = {Continental Shelf Res.} } @article{easter1993, title = {Two Modified Versions of Bott's Positive-Definite Numerical Advection Scheme}, author = {Easter, Richard C.}, journal = {Monthly Weather Review}, volume = {121}, year = {1993}, pages = {297--304}, doi = {10.1175/1520-0493(1993)121<0297:TMVOBP>2.0.CO;2} } @book{durran2010, title = {Numerical Methods for Fluid Dynamics With Applications to Geophysics}, author = {Durran, Dale R.}, year = {2010}, publisher = {Springer-Verlag New York}, doi = {10.1007/978-1-4419-6412-0} } @article{russell1981, title = {A New Finite-Differencing Scheme for the Tracer Transport Equation}, author = {Russell, Gary L. and Jean A. Lerner}, journal = {Journal of Applied Meteorology}, year = {1981}, volume = {20}, pages = {1483--1498}, doi = {10.1175/1520-0450(1981)020<1483:ANFDSF>2.0.CO;2} } @inproceedings{huynh1997, title = {Schemes and constraints for advection}, booktitle = {Fifteenth International Conference on Numerical Methods in Fluid Dynamics}, editor = {Kutler, P. and J. Flores and J.J. Chattot}, volume = {490}, publisher = {Springer, Berlin, Heidelberg}, author = {H. T. Huynh}, year = {1997}, doi = {10.1007/BFb0107151} } @article{lin1994, title = {A Class of the van Leer-type Transport Schemes and Its Application to the Moisture Transport in a General Circulation Model}, author = {Lin, Shian-Jiann and Winston C. Chao and Y. C. Sud and G. K. Walker}, journal = {Mon. Wea. Rev.}, year = {1994}, volume = {122}, pages = {1575--1593}, doi = {10.1175/1520-0493(1994)122<1575:ACOTVL>2.0.CO;2} } @article{bleck1990, title = {A wind‐driven isopycnic coordinate model of the north and equatorial Atlantic Ocean: 1. Model development and supporting experiments}, author = {Bleck, Rainer and Linda T. Smith}, year = {1990}, journal = {JGR Oceans}, volume = {95}, pages = {3273--3285}, doi = {10.1029/JC095iC03p03273} } @article{hallberg1997a, doi = {DOI:10.1006/jcph.1997.5734}, title = {Stable Split Time Stepping Schemes for Large-Scale Ocean Modeling}, author = {Hallberg, Robert}, year = {1997}, volume = {135}, pages = {54--65}, journal = {Journal of Computational Physics} } @article(shchepetkin2005, author = "A.~F. Shchepetkin and J.~C. McWilliams", year = "2005", title = "The Regional Ocean Modeling System (ROMS): A split-explicit, free-surface, topography-following coordinates oceanic model", journal = "Ocean Modeling", volume = "9", pages = "347--404" ) @article{gent1990, title = {Isopycnal Mixing in Ocean Circulation Models}, author = {Gent, Peter R. and James C. Mcwilliams}, journal = {J. Phys. Oceanogr.}, year = {1990}, volume = {20}, pages = {150--155}, doi = {10.1175/1520-0485(1990)020<0150:IMIOCM>2.0.CO;2} } @article{visbeck1997, title = {Specification of Eddy Transfer Coefficients in Coarse-Resolution Ocean Circulation Models}, author = {Visbeck, Martin and John Marshall and Tom Haine and Mike Spall}, journal = {J. Phys. Oceanogr.}, year = {1997}, volume = {27}, pages = {381--402}, doi = {10.1175/1520-0485(1997)027<0381:SOETCI>2.0.CO;2} } @article{visbeck1996, author = {Viscbeck, M. and J.C. Marshall and H. Jones}, year = {1996}, title = {Dynamics of isolated convective regions in the ocean}, journal = {J. Phys. Oceanogr.}, volume = {26}, pages = {1721--1734}, doi = {10.1175/1520-0485(1996)026<1721:DOICRI>2.0.CO;2} } @article{fox-kemper2008, author = {Fox-Kemper, B. and R. Ferrari and R. Hallberg}, year = {2008}, title = {Parameterization of Mixed Layer Eddies. Part I: Theory and Diagnosis}, journal = {J. Phys. Oceangraphy}, volume = {38}, pages = {1145--1165}, doi = {10.1175/2007JPO3792.1} } @article{fox-kemper2008-2, author = {Fox-Kemper, B. and R. Ferrari}, year = {2008}, title = {Parameterization of Mixed Layer Eddies. Part II: Prognosis and Impact}, journal = {J. Phys. Oceangraphy}, volume = {38}, pages = {1166--1179}, doi = {10.1175/2007JPO3788.1} } @article{marshall2010, author = {Marshall, D. P. and A. J. Adcroft}, year = {2010}, title = {Parameterization of ocean eddies: Potential vorticity mixing, energetics and Arnold first stability theorem}, journal = {Ocean Modelling}, volume = {32}, pages = {188--204}, doi = {10.1016/j.ocemod.2010.02.001} } @inproceedings{millero1978, author = {Millero, F.J.}, title = {Freezing point of seawater}, note = {Annex 6}, booktitle = {Eight report of the Joint Panel on Oceanographic Tables and Standards (JPOTS)}, publisher = {UNESCO technical papers in marine sciences}, number = {28}, pages = {29--35}, year = {1978}, url = {https://www.researchgate.net/publication/292574579_Freezing_point_of_seawater} } @article{roquet2015, author = {Roquet, F. and G. Madec and T. J. McDougall and P. M. Barker}, year = {2015}, title = {Accurate polynomial expressions for the density and specific volume of seawater using the TEOS-10 standard}, journal = {Ocean Modelling}, volume = {90}, pages = {29--43} } @article{jackett1995, author = {Jackett, David R. and Trevor J. McDougall}, title = {Minimal Adjustment of Hydrographic Profiles to Achieve Static Stability}, year = {1995}, journal = {J. Atmos. Ocean. Tech.}, volume = {12}, pages = {381-389}, doi = {10.1175/1520-0426(1995)012<0381:MAOHPT>2.0.CO;2} } @article{sun1999, title = {Inclusion of Thermobaricity in Isopycnic-Coordinate Ocean Models}, author = {Sun, Shan and Rainer Bleck and Claes Rooth and John Dukowicz and Eric Chassignet and Peter Killworth}, journal = {Journal of Physical Oceanography}, year = {1999}, volume = {29}, pages = {2719--2729} } @article{hallberg2005, author = {Hallberg, Robert}, year = {2005}, title = {A thermobaric instability of Lagrangian vertical coordinate ocean models}, journal = {Ocean Modelling}, volume = {8}, doi = {10.1016/j.ocemod.2004.01.001} } @article{bell1975, doi = {10.1017/s0022112075000560}, year = 1975, publisher = {Cambridge University Press ({CUP})}, volume = {67}, number = {4}, pages = {705--722}, author = {T. H. Bell}, title = {Lee waves in stratified flows with simple harmonic time dependence}, journal = {J. Fluid Mech.} } @article{nikurashin2010a, doi = {10.1175/2009jpo4199.1}, year = 2010, publisher = {American Meteorological Society}, volume = {40}, number = {5}, pages = {1055--1074}, author = {M. Nikurashin and R. Ferrari}, title = {Radiation and Dissipation of Internal Waves Generated by Geostrophic Motions Impinging on Small-Scale Topography: Theory}, journal = {J. Phys. Oceanography} } @article{nikurashin2010b, doi = {10.1175/2010jpo4315.1}, year = 2010, publisher = {American Meteorological Society}, volume = {40}, number = {9}, pages = {2025--2042}, author = {M. Nikurashin and R. Ferrari}, title = {Radiation and Dissipation of Internal Waves Generated by Geostrophic Motions Impinging on Small-Scale Topography: Application to the Southern Ocean}, journal = {J. Phys. Oceanography} } @article{miles1961, title = {On the stability of heterogeneous shear flows}, author = {JW Miles}, year = {1961}, journal = {J. of Fluid Mech.}, volume = {10}, pages = {496--508}, doi = {10.1017/S0022112061000305} } @article{bryan1979, doi = {10.1029/jc084ic05p02503}, year = 1979, publisher = {American Geophysical Union ({AGU})}, volume = {84}, number = {C5}, pages = {2503}, author = {K. Bryan and L. J. Lewis}, title = {A water mass model of the World Ocean}, journal = {J. Geophys. Res.} } @techreport{griffies2015a, author = {S. M. Griffies and M. Levy and A. J. Adcroft and G. Danabasoglu and R. W. Hallberg and D. Jacobsen and W. Large and T. Ringler}, title = {Theory and Numerics of the Community Ocean Vertical Mixing (CVMix) Project}, year = {2015}, pages = {98 pp}, institution = {NOAA GFDL} } @inbook{niiler1977, author = {P. P. Niiler and E. B. Kraus}, chapter = {One-dimesional models of the upper ocean}, title = {Modelling and Prediction of the Upper Layers of the Ocean}, year = {1977}, editor = {E. B. Kraus}, publisher = {Pergamon Press} } @article{oberhuber1993, doi = {10.1175/1520-0485(1993)023<0830:sotacw>2.0.co;2}, year = 1993, publisher = {American Meteorological Society}, volume = {23}, number = {5}, pages = {830--845}, author = {J. M. Oberhuber}, title = {Simulation of the Atlantic Circulation with a Coupled Sea Ice-Mixed Layer-Isopycnal General Circulation Model. Part {II}: Model Experiment}, journal = {J. Phys. Oceanography} } @techreport{muller2003, doi = {10.21236/ada618366}, year = 2003, publisher = {Defense Technical Information Center}, author = {P. Muller}, institution = {School of Ocean and Earth Science and Technology}, title = {A{\textquotesingle}ha Huliko{\textquotesingle}a Workshop Series} } @article{wang2003, doi = {10.1029/2003gl017869}, year = 2003, publisher = {American Geophysical Union ({AGU})}, volume = {30}, number = {18}, author = {D. Wang}, title = {Entrainment laws and a bulk mixed layer model of rotating convection derived from large-eddy simulations}, journal = {Geophys. Res. Lett.} } @article{kraus1967, doi = {10.3402/tellusa.v19i1.9753}, year = 1967, publisher = {Informa {UK} Limited}, volume = {19}, number = {1}, pages = {98--106}, author = {E. B. Kraus and J. S. Turner}, title = {A one-dimensional model of the seasonal thermocline {II}. The general theory and its consequences}, journal = {Tellus} }