#!/bin/ksh
set -xue

export PS4='$SECONDS + '
date

##########################################################
##########################################################
export DATA=${DATA:-${DATAROOT:?}/${jobid:?}}
mkdir -p $DATA
cd $DATA

cp $(which postmsg) $DATA   # need to call this because the obsproc VS is not NCO stanards complliant.

export tmmark=tm00
export cycle=t${cyc}z

##########################
# Specify NET and RUN Name
##########################
export NET=cfs
export RUN=cdas
export RUN1=cdas1

####################################
# Determine Job Output Name on System
####################################
export pgmout="OUTPUT.$$"

##########################################################
# define cfs directories/scripts/executables
##########################################################

export EXECcfs=$HOMEcfs/exec
export PARMcfs=$HOMEcfs/parm
export USHcfs=$HOMEcfs/ush
export FIXcfs=$HOMEcfs/fix

export HOMEobsproc=${HOMEobsproc:-${PACKAGEROOT}/obsproc.${obsproc_ver}}
export PARMPREP=$PARMcfs/cfs_parm_prep
export PARMSYND=$PARMcfs/cfs_parm_prep

##############################
# Run setpdy and initialize PDY variables
##############################
sh setpdy.sh
. ./PDY

##############################################
# Define COM directories
##############################################
export COMROT=$(compath.py -o ${NET}/${cfs_ver})
export  COMIN=$(compath.py -o ${NET}/${cfs_ver}/${RUN}.${PDY})
export COMOUT=$(compath.py -o ${NET}/${cfs_ver}/${RUN}.${PDY})
mkdir -m775 -p $COMOUT

##############################################
# Specify varaibles specific to this execution of script
##############################################

export OMP_NUM_THREADS=1
export POE=YES
#  NPROCS indicates the number of POE tasks
#   {Applies only when PREPDATA=YES below and POE=YES (default)}

export NPROCS=$NCPUS

#  NSPLIT indicates the number of tasks for running PREPDATA
#   (PREPDATA processing will be split into this many parts)
#   {Applies only when PREPDATA=YES below and POE=YES (default)}
#   (must be .le. $NPROCS)

export NSPLIT=$NPROCS

#  BUFRLIST indicates the list of BUFR data dump file names to process

export BUFRLIST=${BUFRLIST:-"adpupa proflr aircar aircft satwnd adpsfc  sfcshp vadwnd wdsatr ascatw rassda gpsipw"}

# VARIABLES THAT CONTROL PROCESSING OF INDIVIDUAL PROGRAMS
# --------------------------------------------------------

#  -- These can individually be switched to NO without affecting the
#      success of other programs and the success of the complete job
#      (all should normally be set to YES unless otherwise specified;
#       if job fails in one of these programs, set offending program
#       to NO and resubmit to "work-around" problem)

export SYNDATA=${SYNDATA:-YES}     # Execute program SYNDAT_SYNDATA   if YES
export PREPACQC=${PREPACQC:-YES}   # Execute PREPACQC script processing
export   PROCESS_ACQC=YES            # Run program PREPOBS_PREPACQC
export   PROCESS_ACPF=NO             # Do not run program PREPOBS_PREPACPF (profiles are not generated in CFS)
export PROFCQC=${PROFCQC:-YES}     # Execute program PREPOBS_PROFCQC  if YES
export CQCVAD=${CQCVAD:-YES}       # Execute program PREPOBS_CQCVAD   if YES
export CQCBUFR=${CQCBUFR:-YES}     # Execute program PREPOBS_CQCBUFR  if YES
export OIQCBUFR=${OIQCBUFR:-YES}   # Execute program PREPOBS_OIQCBUFR if YES


#  -- If any of these are switched to NO it will affect the success of
#      other programs and the success of the complete job
#      (these are set-up only for CHECKOUT runs - they should always
#       be set to YES for operational runs)

export PREPDATA=YES   # Execute programs PREPOBS_MPCOPYBUFR, PREPOBS_PREPDATA,
# PREPOBS_LISTHEADERS and PREPOBS_MONOPREPBUFR if YES

export GETGUESS=YES   # Encode first guess (background) values interpolated to
# observation locations in the PREPBUFR file for use by
# the q.c. programs.  This guess is always from a global
# sigma guess file valid at the center PREPBUFR
# processing date/time.

#export envir_getges=$(basename $COMROT) 
#export envir_getges=${envir_getges:-${envir:-prod}}
#export USHGETGES=$HOMEcfs/global_shared_cfs/ush
#export USHGETGES=$HOMEprepobs/ush
#export network_getges=cfs-cdas

export DO_QC=YES      # IF NO, programs PREPOBS_PREPACQC, PREPOBS_PREPACPF,

# HOMEgfs is directory path to prepobs_errtable.global (PRVT), used in
# prepobs_makeprepbufr.sh and its child scripts prepobs_syndata.sh and
# prepobsp_prevents.sh.
export HOMEgfs=${HOMEgfs:-$(compath.py gfs/${gfs_ver})} 

export PRVT=$HOMEgfs/fix/prepobs_errtable.global
#export OIQCT=$FIXcfs/cfs_fix_cdas/prepobs_oiqc.oberrs
export OIQCX=${OIQCX:-$EXECcfs/prepobs_oiqcbufr}
#export USHOIQC=$HOMEcfs/ush
export ushscript_prep=${ushscript_prep:-$USHprepobs}

env

#############################################################
# execute the script - use CFS cfs_vers of makeprepbufr
#############################################################

RUN=$RUN1 ${PREPSH:-$HOMEcfs/scripts/exglobal_makeprepbufr.sh}
export err=$?; err_chk

cat $pgmout
msg="ENDED NORMALLY."
postmsg "$msg"


########################################
# Remove the Temporary working directory
########################################
cd $DATAROOT
if [ ${KEEPDATA:-NO} = NO ] ; then rm -rf $DATA ; fi

date